RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 ARID3BQ8IVW6 561 aaPredicted RBP20.8■□□□□ 0.92
ATG4D-204ENST00000586417 DCAKDQ8WVC6 231 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 STAMBPL1Q96FJ0 436 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 CNOT10Q9H9A5 744 aaKnown RBP20.8■□□□□ 0.92
ATG4D-204ENST00000586417 LRRC40Q9H9A6 602 aa20.8■□□□□ 0.92
ATG4D-204ENST00000586417 GRXCR2A6NFK2 248 aa20.79■□□□□ 0.92
ATG4D-204ENST00000586417 PFKLP17858 780 aa20.79■□□□□ 0.92
ATG4D-204ENST00000586417 ACVRL1P37023 503 aa20.79■□□□□ 0.92
ATG4D-204ENST00000586417 SGSHP51688 502 aa20.79■□□□□ 0.92
ATG4D-204ENST00000586417 CDH4P55283 916 aa20.79■□□□□ 0.92
ATG4D-204ENST00000586417 GNGT1P63211 74 aa20.79■□□□□ 0.92
ATG4D-204ENST00000586417 CRADDP78560 199 aa20.79■□□□□ 0.92
ATG4D-204ENST00000586417 TNK2Q07912 1038 aa20.79■□□□□ 0.92
ATG4D-204ENST00000586417 PRPSAP1Q14558 356 aa20.79■□□□□ 0.92
ATG4D-204ENST00000586417 RABGAP1LQ5R372 815 aa20.79■□□□□ 0.92
ATG4D-204ENST00000586417 ADGRD1Q6QNK2 874 aa20.79■□□□□ 0.92
ATG4D-204ENST00000586417 TAOK1Q7L7X3 1001 aa20.79■□□□□ 0.92
ATG4D-204ENST00000586417 SPATA22Q8NHS9 363 aa20.79■□□□□ 0.92
ATG4D-204ENST00000586417 MRRFQ96E11 262 aaKnown RBP20.79■□□□□ 0.92
ATG4D-204ENST00000586417 RIPOR3Q96MK2 946 aa20.79■□□□□ 0.92
ATG4D-204ENST00000586417 MYADMQ96S97 322 aa20.79■□□□□ 0.92
ATG4D-204ENST00000586417 SYBUQ9NX95 663 aa20.79■□□□□ 0.92
ATG4D-204ENST00000586417 UBP1Q9NZI7 540 aa20.79■□□□□ 0.92
ATG4D-204ENST00000586417 NUP210Q8TEM1 1887 aaPredicted RBP20.78■□□□□ 0.92
ATG4D-204ENST00000586417 TRDMT1O14717 391 aaKnown RBP20.78■□□□□ 0.92
ATG4D-204ENST00000586417 LATS1O95835 1130 aa20.78■□□□□ 0.92
ATG4D-204ENST00000586417 PPARDQ03181 441 aa20.78■□□□□ 0.92
ATG4D-204ENST00000586417 FAM78AQ5JUQ0 283 aa20.78■□□□□ 0.92
ATG4D-204ENST00000586417 TRABD2AQ86V40 505 aa20.78■□□□□ 0.92
ATG4D-204ENST00000586417 TEX26Q8N6G2 289 aa20.78■□□□□ 0.92
ATG4D-204ENST00000586417 OR52K2Q8NGK3 314 aa20.78■□□□□ 0.92
ATG4D-204ENST00000586417 GSDMBQ8TAX9 411 aa20.78■□□□□ 0.92
ATG4D-204ENST00000586417 MDM1Q8TC05 714 aa20.78■□□□□ 0.92
ATG4D-204ENST00000586417 SUSD6Q92537 303 aa20.78■□□□□ 0.92
ATG4D-204ENST00000586417 SP110Q9HB58 689 aa20.78■□□□□ 0.92
ATG4D-204ENST00000586417 TDP1Q9NUW8 608 aa20.78■□□□□ 0.92
ATG4D-204ENST00000586417 CFAP97Q9P2B7 532 aa20.78■□□□□ 0.92
ATG4D-204ENST00000586417 ARHGAP26Q9UNA1 814 aa20.78■□□□□ 0.92
ATG4D-204ENST00000586417 ACTL7BQ9Y614 415 aa20.78■□□□□ 0.92
ATG4D-204ENST00000586417 A6NNZ2 444 aa20.77■□□□□ 0.92
ATG4D-204ENST00000586417 SOBPA7XYQ1 873 aa20.77■□□□□ 0.92
ATG4D-204ENST00000586417 LEFTY2O00292 366 aa20.77■□□□□ 0.92
ATG4D-204ENST00000586417 PSMD3O43242 534 aa20.77■□□□□ 0.92
ATG4D-204ENST00000586417 MTHFRP42898 656 aa20.77■□□□□ 0.92
ATG4D-204ENST00000586417 IL10RBQ08334 325 aa20.77■□□□□ 0.92
ATG4D-204ENST00000586417 SLC10A7Q0GE19 358 aa20.77■□□□□ 0.92
ATG4D-204ENST00000586417 TUBB8Q3ZCM7 444 aa20.77■□□□□ 0.92
ATG4D-204ENST00000586417 Q6ZNB5 142 aa20.77■□□□□ 0.92
ATG4D-204ENST00000586417 SH3RF2Q8TEC5 729 aa20.77■□□□□ 0.92
ATG4D-204ENST00000586417 SLC44A1Q8WWI5 657 aa20.77■□□□□ 0.92
ATG4D-204ENST00000586417 SELENOSQ9BQE4 189 aa20.77■□□□□ 0.92
ATG4D-204ENST00000586417 SMYD2Q9NRG4 433 aa20.77■□□□□ 0.92
ATG4D-204ENST00000586417 AAR2Q9Y312 384 aaKnown RBP20.77■□□□□ 0.92
ATG4D-204ENST00000586417 CLDN11O75508 207 aa20.77■□□□□ 0.91
ATG4D-204ENST00000586417 MT-CYBP00156 380 aaPredicted RBP20.77■□□□□ 0.91
ATG4D-204ENST00000586417 VIPR2P41587 438 aa20.77■□□□□ 0.91
ATG4D-204ENST00000586417 RENBPP51606 427 aa20.77■□□□□ 0.91
ATG4D-204ENST00000586417 NR1H3Q13133 447 aa20.77■□□□□ 0.91
ATG4D-204ENST00000586417 TRMT10BQ6PF06 316 aaKnown RBP20.77■□□□□ 0.91
ATG4D-204ENST00000586417 CYS1Q717R9 158 aa20.77■□□□□ 0.91
ATG4D-204ENST00000586417 CHST9Q7L1S5 443 aa20.77■□□□□ 0.91
ATG4D-204ENST00000586417 CCNJLQ8IV13 435 aa20.77■□□□□ 0.91
ATG4D-204ENST00000586417 SRRM1Q8IYB3 904 aaKnown RBP20.77■□□□□ 0.91
ATG4D-204ENST00000586417 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.77■□□□□ 0.91
ATG4D-204ENST00000586417 MZB1Q8WU39 189 aa20.77■□□□□ 0.91
ATG4D-204ENST00000586417 RSPRY1Q96DX4 576 aa20.77■□□□□ 0.91
ATG4D-204ENST00000586417 LRRC3BQ96PB8 259 aa20.77■□□□□ 0.91
ATG4D-204ENST00000586417 MOCS1Q9NZB8 636 aa20.77■□□□□ 0.91
ATG4D-204ENST00000586417 CXorf49A8MYA2 514 aaPredicted RBP20.76■□□□□ 0.91
ATG4D-204ENST00000586417 GFRA2O00451 464 aa20.76■□□□□ 0.91
ATG4D-204ENST00000586417 PRAMEF11O60813 436 aa20.76■□□□□ 0.91
ATG4D-204ENST00000586417 ANXA9O76027 345 aa20.76■□□□□ 0.91
ATG4D-204ENST00000586417 ALDH1A2O94788 518 aa20.76■□□□□ 0.91
ATG4D-204ENST00000586417 PGAM1P18669 254 aa20.76■□□□□ 0.91
ATG4D-204ENST00000586417 SP100P23497 879 aaPredicted RBP20.76■□□□□ 0.91
ATG4D-204ENST00000586417 HOXD9P28356 352 aaPredicted RBP20.76■□□□□ 0.91
ATG4D-204ENST00000586417 MSH2P43246 934 aa20.76■□□□□ 0.91
ATG4D-204ENST00000586417 CASC4Q6P4E1 433 aa20.76■□□□□ 0.91
ATG4D-204ENST00000586417 HLA-CQ95604 372 aa20.76■□□□□ 0.91
ATG4D-204ENST00000586417 ASB16Q96NS5 453 aa20.76■□□□□ 0.91
ATG4D-204ENST00000586417 APOL2Q9BQE5 337 aa20.76■□□□□ 0.91
ATG4D-204ENST00000586417 NAT9Q9BTE0 207 aa20.76■□□□□ 0.91
ATG4D-204ENST00000586417 MAGEH1Q9H213 219 aa20.76■□□□□ 0.91
ATG4D-204ENST00000586417 PDFQ9HBH1 243 aa20.76■□□□□ 0.91
ATG4D-204ENST00000586417 GDE1Q9NZC3 331 aa20.76■□□□□ 0.91
ATG4D-204ENST00000586417 CDH7Q9ULB5 785 aa20.76■□□□□ 0.91
ATG4D-204ENST00000586417 A0A0D9SEW6 157 aa20.75■□□□□ 0.91
ATG4D-204ENST00000586417 A0A1B0GVM2 712 aa20.75■□□□□ 0.91
ATG4D-204ENST00000586417 TCAF2A6NFQ2 919 aa20.75■□□□□ 0.91
ATG4D-204ENST00000586417 FAM159BA6NKW6 160 aa20.75■□□□□ 0.91
ATG4D-204ENST00000586417 TSPAN3O60637 253 aa20.75■□□□□ 0.91
ATG4D-204ENST00000586417 ADRA1AP35348 466 aa20.75■□□□□ 0.91
ATG4D-204ENST00000586417 GNA12Q03113 381 aa20.75■□□□□ 0.91
ATG4D-204ENST00000586417 MARC1Q5VT66 337 aa20.75■□□□□ 0.91
ATG4D-204ENST00000586417 NAPEPLDQ6IQ20 393 aa20.75■□□□□ 0.91
ATG4D-204ENST00000586417 ZNF354CQ86Y25 554 aa20.75■□□□□ 0.91
ATG4D-204ENST00000586417 PPP1R2P1Q96PQ5 205 aa20.75■□□□□ 0.91
ATG4D-204ENST00000586417 DDX50Q9BQ39 737 aaKnown RBP20.75■□□□□ 0.91
ATG4D-204ENST00000586417 SLC25A51Q9H1U9 297 aa20.75■□□□□ 0.91
ATG4D-204ENST00000586417 BFARQ9NZS9 450 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms