RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 FLT3P36888 993 aa11.86□□□□□ -0.51
LIG3-207ENST00000586119 GABREP78334 506 aa11.86□□□□□ -0.51
LIG3-207ENST00000586119 SKOR2Q2VWA4 1001 aaPredicted RBP11.86□□□□□ -0.51
LIG3-207ENST00000586119 HSP90AA4PQ58FG1 418 aa11.86□□□□□ -0.51
LIG3-207ENST00000586119 LEKR1Q6ZMV7 388 aa11.86□□□□□ -0.51
LIG3-207ENST00000586119 PTAR1Q7Z6K3 402 aaPredicted RBP11.86□□□□□ -0.51
LIG3-207ENST00000586119 DCAF4L2Q8NA75 395 aa11.86□□□□□ -0.51
LIG3-207ENST00000586119 OR6K2Q8NGY2 324 aa11.86□□□□□ -0.51
LIG3-207ENST00000586119 GPT2Q8TD30 523 aa11.86□□□□□ -0.51
LIG3-207ENST00000586119 BAP1Q92560 729 aa11.86□□□□□ -0.51
LIG3-207ENST00000586119 LGMNQ99538 433 aa11.86□□□□□ -0.51
LIG3-207ENST00000586119 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.86□□□□□ -0.51
LIG3-207ENST00000586119 C2orf49Q9BVC5 232 aaPredicted RBP11.86□□□□□ -0.51
LIG3-207ENST00000586119 HDAC8Q9BY41 377 aa11.86□□□□□ -0.51
LIG3-207ENST00000586119 SEMA4CQ9C0C4 833 aa11.86□□□□□ -0.51
LIG3-207ENST00000586119 TCEAL2Q9H3H9 227 aaPredicted RBP11.86□□□□□ -0.51
LIG3-207ENST00000586119 DYRK4Q9NR20 520 aa11.86□□□□□ -0.51
LIG3-207ENST00000586119 RWDD2AQ9UIY3 292 aa11.86□□□□□ -0.51
LIG3-207ENST00000586119 PNMA8BQ9ULN7 279 aaPredicted RBP11.86□□□□□ -0.51
LIG3-207ENST00000586119 ITM2BQ9Y287 266 aa11.86□□□□□ -0.51
LIG3-207ENST00000586119 FARP1Q9Y4F1 1045 aaPredicted RBP11.86□□□□□ -0.51
LIG3-207ENST00000586119 FADS3Q9Y5Q0 445 aa11.86□□□□□ -0.51
LIG3-207ENST00000586119 HS3ST3A1Q9Y663 406 aa11.86□□□□□ -0.51
LIG3-207ENST00000586119 CHD5Q8TDI0 1954 aa11.86□□□□□ -0.51
LIG3-207ENST00000586119 IGLV3-10A0A075B6K4 115 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 CPED1A4D0V7 1026 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 IGLON5A6NGN9 336 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 GOLGA8SH3BPF8 625 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 SCAMP1O15126 338 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 FGFR1OPO95684 399 aaKnown RBP11.85□□□□□ -0.51
LIG3-207ENST00000586119 ADRB3P13945 408 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 L1CAMP32004 1257 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 ABL2P42684 1182 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 MTIF2P46199 727 aaKnown RBP11.85□□□□□ -0.51
LIG3-207ENST00000586119 CCNHP51946 323 aaPredicted RBP11.85□□□□□ -0.51
LIG3-207ENST00000586119 C1QBPQ07021 282 aaKnown RBP11.85□□□□□ -0.51
LIG3-207ENST00000586119 C1orf61Q13536 156 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 CDKN3Q16667 212 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 CARD16Q5EG05 197 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 BRMS1LQ5PSV4 323 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 FAM102AQ5T9C2 384 aaPredicted RBP11.85□□□□□ -0.51
LIG3-207ENST00000586119 ARHGAP40Q5TG30 622 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 PARS2Q7L3T8 475 aaKnown RBP11.85□□□□□ -0.51
LIG3-207ENST00000586119 SETD3Q86TU7 594 aaPredicted RBP11.85□□□□□ -0.51
LIG3-207ENST00000586119 FAM131BQ86XD5 332 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 XYLT1Q86Y38 959 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 DRC7Q8IY82 874 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 FAM71AQ8IYT1 594 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 IFI44Q8TCB0 444 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 PGAP3Q96FM1 320 aaPredicted RBP11.85□□□□□ -0.51
LIG3-207ENST00000586119 HIC2Q96JB3 615 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 C1orf74Q96LT6 269 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 CFAP57Q96MR6 1250 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 KLF6Q99612 283 aaPredicted RBP11.85□□□□□ -0.51
LIG3-207ENST00000586119 TM6SF2Q9BZW4 377 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 NUP62CLQ9H1M0 184 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 ATP13A1Q9HD20 1204 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 GPR27Q9NS67 375 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 NLGN3Q9NZ94 848 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 KIAA1468Q9P260 1216 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 LRRK1Q38SD2 2015 aa11.85□□□□□ -0.51
LIG3-207ENST00000586119 ILVBLA1L0T0 632 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 PYCARD-AS1I3L0S3 204 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 TK2O00142 265 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 GJB6O95452 261 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 CSF2P04141 144 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 PLA2G2AP14555 144 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 RECQLP46063 649 aaPredicted RBP11.84□□□□□ -0.51
LIG3-207ENST00000586119 GABRB2P47870 512 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 SERPINH1P50454 418 aaKnown RBP11.84□□□□□ -0.51
LIG3-207ENST00000586119 NEK3P51956 506 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 EIF2B5Q13144 721 aaKnown RBP11.84□□□□□ -0.51
LIG3-207ENST00000586119 KLHL40Q2TBA0 621 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 DEFB133Q30KQ1 61 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 SLC25A52Q3SY17 297 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 HS1BP3Q53T59 392 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 LRRC73Q5JTD7 316 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 PERM1Q5SV97 790 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 GUSBP11Q6P575 273 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 LRRC31Q6UY01 552 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 NYAP1Q6ZVC0 841 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 BNIPLQ7Z465 357 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 NOP9Q86U38 636 aaKnown RBP11.84□□□□□ -0.51
LIG3-207ENST00000586119 RBFAQ8N0V3 343 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 EMC1Q8N766 993 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 ZNF548Q8NEK5 533 aaPredicted RBP11.84□□□□□ -0.51
LIG3-207ENST00000586119 MAPK15Q8TD08 544 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 LMX1AQ8TE12 382 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 CPA5Q8WXQ8 436 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 C18orf8Q96DM3 657 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 FEM1CQ96JP0 617 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 FAM81BQ96LP2 452 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 CCDC114Q96M63 670 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 HEPHQ9BQS7 1158 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 ABCG4Q9H172 646 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 PDCL3Q9H2J4 239 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 ZDHHC6Q9H6R6 413 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 ASCL3Q9NQ33 180 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 HECAQ9UBI9 543 aaPredicted RBP11.84□□□□□ -0.51
LIG3-207ENST00000586119 TMEM59LQ9UK28 342 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms