RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 ZNF783Q6ZMS7 281 aa14.77□□□□□ -0.05
SDF2-202ENST00000585428 CREBRFQ8IUR6 639 aa14.77□□□□□ -0.05
SDF2-202ENST00000585428 OR7D4Q8NG98 312 aa14.77□□□□□ -0.05
SDF2-202ENST00000585428 LENG8Q96PV6 779 aaPredicted RBP14.77□□□□□ -0.05
SDF2-202ENST00000585428 DEPDC7Q96QD5 511 aa14.77□□□□□ -0.05
SDF2-202ENST00000585428 HAPLN3Q96S86 360 aa14.77□□□□□ -0.05
SDF2-202ENST00000585428 TBCBQ99426 244 aa14.77□□□□□ -0.05
SDF2-202ENST00000585428 KLF6Q99612 283 aaPredicted RBP14.77□□□□□ -0.05
SDF2-202ENST00000585428 DUSP23Q9BVJ7 150 aa14.77□□□□□ -0.05
SDF2-202ENST00000585428 CEP44Q9C0F1 390 aa14.77□□□□□ -0.05
SDF2-202ENST00000585428 OSBPL2Q9H1P3 480 aa14.77□□□□□ -0.05
SDF2-202ENST00000585428 KLF15Q9UIH9 416 aa14.77□□□□□ -0.05
SDF2-202ENST00000585428 STAP1Q9ULZ2 295 aa14.77□□□□□ -0.05
SDF2-202ENST00000585428 FADS3Q9Y5Q0 445 aa14.77□□□□□ -0.05
SDF2-202ENST00000585428 CSNK1G3Q9Y6M4 447 aa14.77□□□□□ -0.05
SDF2-202ENST00000585428 CXorf51AA0A1B0GTR3 108 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 A6NNZ2 444 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 RAD51BO15315 384 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 AP1G1O43747 822 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 SRGAP2O75044 1071 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 USP12O75317 370 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 ENDOD1O94919 500 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 ADRB3P13945 408 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 ITGB7P26010 798 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 NEK3P51956 506 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 CXADRP78310 365 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 CARD16Q5EG05 197 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 KIAA1161Q6NSJ0 714 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 RETSATQ6NUM9 610 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 TFAP2DQ7Z6R9 452 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 PLPP6Q8IY26 295 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 GRIN3AQ8TCU5 1115 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 VOPP1Q96AW1 172 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 C18orf8Q96DM3 657 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 WBP1Q96G27 269 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 PPP1R16AQ96I34 528 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 HEPHQ9BQS7 1158 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 C1QTNF2Q9BXJ5 285 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 ABCG4Q9H172 646 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 SYNCQ9H7C4 482 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 POLR1BQ9H9Y6 1135 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 DNAJC28Q9NX36 388 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 KIAA1468Q9P260 1216 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 PAXBP1Q9Y5B6 917 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 MYLKQ15746 1914 aa14.76□□□□□ -0.05
SDF2-202ENST00000585428 DOCK9Q9BZ29 2069 aa14.75□□□□□ -0.05
SDF2-202ENST00000585428 ATMQ13315 3056 aa14.75□□□□□ -0.05
SDF2-202ENST00000585428 SHROOM3Q8TF72 1996 aa14.75□□□□□ -0.05
SDF2-202ENST00000585428 ERVH48-1M5A8F1 160 aa14.75□□□□□ -0.05
SDF2-202ENST00000585428 CSO75390 466 aaKnown RBP14.75□□□□□ -0.05
SDF2-202ENST00000585428 NEBLO76041 1014 aa14.75□□□□□ -0.05
SDF2-202ENST00000585428 PLA2G2AP14555 144 aa14.75□□□□□ -0.05
SDF2-202ENST00000585428 NME1P15531 152 aaKnown RBP14.75□□□□□ -0.05
SDF2-202ENST00000585428 RECQLP46063 649 aaPredicted RBP14.75□□□□□ -0.05
SDF2-202ENST00000585428 SULT1E1P49888 294 aa14.75□□□□□ -0.05
SDF2-202ENST00000585428 SERPINH1P50454 418 aaKnown RBP14.75□□□□□ -0.05
SDF2-202ENST00000585428 PCBP4P57723 403 aaKnown RBP14.75□□□□□ -0.05
SDF2-202ENST00000585428 BPIFB4P59827 614 aa14.75□□□□□ -0.05
SDF2-202ENST00000585428 GABREP78334 506 aa14.75□□□□□ -0.05
SDF2-202ENST00000585428 ARF5P84085 180 aa14.75□□□□□ -0.05
SDF2-202ENST00000585428 TRNP1Q6NT89 227 aa14.75□□□□□ -0.05
SDF2-202ENST00000585428 IGF2-ASQ6U949 168 aa14.75□□□□□ -0.05
SDF2-202ENST00000585428 KYAT3Q6YP21 454 aaKnown RBP14.75□□□□□ -0.05
SDF2-202ENST00000585428 ZNF605Q86T29 641 aa14.75□□□□□ -0.05
SDF2-202ENST00000585428 XYLT1Q86Y38 959 aa14.75□□□□□ -0.05
SDF2-202ENST00000585428 PCDH20Q8N6Y1 951 aaKnown RBP14.75□□□□□ -0.05
SDF2-202ENST00000585428 TMEM35BQ8NCS4 154 aa14.75□□□□□ -0.05
SDF2-202ENST00000585428 SNRNP27Q8WVK2 155 aaKnown RBP14.75□□□□□ -0.05
SDF2-202ENST00000585428 ASB12Q8WXK4 309 aa14.75□□□□□ -0.05
SDF2-202ENST00000585428 ISG20Q96AZ6 181 aaKnown RBP14.75□□□□□ -0.05
SDF2-202ENST00000585428 LGMNQ99538 433 aa14.75□□□□□ -0.05
SDF2-202ENST00000585428 SPON2Q9BUD6 331 aa14.75□□□□□ -0.05
SDF2-202ENST00000585428 ASCL3Q9NQ33 180 aa14.75□□□□□ -0.05
SDF2-202ENST00000585428 PPARGC1AQ9UBK2 798 aaKnown RBP14.75□□□□□ -0.05
SDF2-202ENST00000585428 SALL4Q9UJQ4 1053 aa14.75□□□□□ -0.05
SDF2-202ENST00000585428 TMEM59LQ9UK28 342 aa14.75□□□□□ -0.05
SDF2-202ENST00000585428 TP53BP1Q12888 1972 aaPredicted RBP14.74□□□□□ -0.05
SDF2-202ENST00000585428 A0A1W2PNU3 283 aaPredicted RBP14.74□□□□□ -0.05
SDF2-202ENST00000585428 EME2A4GXA9 379 aaPredicted RBP14.74□□□□□ -0.05
SDF2-202ENST00000585428 IGLON5A6NGN9 336 aa14.74□□□□□ -0.05
SDF2-202ENST00000585428 RIOK3O14730 519 aaKnown RBP14.74□□□□□ -0.05
SDF2-202ENST00000585428 TPP1O14773 563 aa14.74□□□□□ -0.05
SDF2-202ENST00000585428 SPINT1O43278 529 aa14.74□□□□□ -0.05
SDF2-202ENST00000585428 PNMA6AP0CW24 399 aaPredicted RBP14.74□□□□□ -0.05
SDF2-202ENST00000585428 CYP11B1P15538 503 aa14.74□□□□□ -0.05
SDF2-202ENST00000585428 TGM2P21980 687 aa14.74□□□□□ -0.05
SDF2-202ENST00000585428 RABIFP47224 123 aa14.74□□□□□ -0.05
SDF2-202ENST00000585428 GNA12Q03113 381 aa14.74□□□□□ -0.05
SDF2-202ENST00000585428 CFHR1Q03591 330 aa14.74□□□□□ -0.05
SDF2-202ENST00000585428 ISXQ2M1V0 245 aa14.74□□□□□ -0.05
SDF2-202ENST00000585428 ZCCHC8Q6NZY4 707 aaKnown RBP14.74□□□□□ -0.05
SDF2-202ENST00000585428 ARCQ7LC44 396 aa14.74□□□□□ -0.05
SDF2-202ENST00000585428 ZSCAN30Q86W11 494 aa14.74□□□□□ -0.05
SDF2-202ENST00000585428 ZNF548Q8NEK5 533 aaPredicted RBP14.74□□□□□ -0.05
SDF2-202ENST00000585428 IFI44Q8TCB0 444 aa14.74□□□□□ -0.05
SDF2-202ENST00000585428 GRAMD1AQ96CP6 724 aa14.74□□□□□ -0.05
SDF2-202ENST00000585428 NAF1Q96HR8 494 aaKnown RBP14.74□□□□□ -0.05
SDF2-202ENST00000585428 SLC46A1Q96NT5 459 aa14.74□□□□□ -0.05
SDF2-202ENST00000585428 DPH1Q9BZG8 443 aa14.74□□□□□ -0.05
SDF2-202ENST00000585428 ZYG11BQ9C0D3 744 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms