RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 FAM186AA6NE01 2351 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 FRYLO94915 3013 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 C2orf16Q68DN1 1984 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 TCRBV9S1A1TA0A576 114 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 ILVBLA1L0T0 632 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 GALR2O43603 387 aaPredicted RBP10.57□□□□□ -0.72
LIG3-203ENST00000585370 AVILO75366 819 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 BANF1O75531 89 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 FAM155BO75949 473 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 ALDH1A2O94788 518 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 OLFM2O95897 454 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 GLUD1P00367 558 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 POLBP06746 335 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 INHBAP08476 426 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 MBL2P11226 248 aaPredicted RBP10.57□□□□□ -0.72
LIG3-203ENST00000585370 HDCP19113 662 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 NFKB1P19838 968 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 CES1P23141 567 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 DDX6P26196 483 aaKnown RBP eCLIP10.57□□□□□ -0.72
LIG3-203ENST00000585370 CNTFP26441 200 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 OR1E1P30953 314 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 CD68P34810 354 aaPredicted RBP10.57□□□□□ -0.72
LIG3-203ENST00000585370 SERPINB9P50453 376 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 ATP1A2P50993 1020 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 CDH17Q12864 832 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 ZBTB17Q13105 803 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 MPP3Q13368 585 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 SERINC3Q13530 473 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 RFTN1Q14699 578 aaPredicted RBP10.57□□□□□ -0.72
LIG3-203ENST00000585370 SPANXN3Q5MJ09 141 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 MARC1Q5VT66 337 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 ASTLQ6HA08 431 aaPredicted RBP10.57□□□□□ -0.72
LIG3-203ENST00000585370 NADSYN1Q6IA69 706 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 OTOP3Q7RTS5 596 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 SLC26A11Q86WA9 606 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 LRRC6Q86X45 466 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 DENND1CQ8IV53 801 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 IGDCC3Q8IVU1 814 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 CNTD1Q8N815 330 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 LEMD2Q8NC56 503 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 PTCD2Q8WV60 388 aaKnown RBP10.57□□□□□ -0.72
LIG3-203ENST00000585370 SLC44A1Q8WWI5 657 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 CDKL2Q92772 493 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 MTBPQ96DY7 904 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 CFAP36Q96G28 342 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 WDR83Q9BRX9 315 aaKnown RBP10.57□□□□□ -0.72
LIG3-203ENST00000585370 IL22Q9GZX6 179 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 IRF2BPLQ9H1B7 796 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 SLC25A51Q9H1U9 297 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 NOL6Q9H6R4 1146 aaKnown RBP10.57□□□□□ -0.72
LIG3-203ENST00000585370 KCNK12Q9HB15 430 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 SP110Q9HB58 689 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 IL21Q9HBE4 155 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 MAN1C1Q9NR34 630 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 MOCS1Q9NZB8 636 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 ZNF212Q9UDV6 495 aa10.57□□□□□ -0.72
LIG3-203ENST00000585370 LSM7Q9UK45 103 aaKnown RBP10.57□□□□□ -0.72
LIG3-203ENST00000585370 SMG5Q9UPR3 1016 aaKnown RBP10.57□□□□□ -0.72
LIG3-203ENST00000585370 DENND4AQ7Z401 1863 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.56□□□□□ -0.72
LIG3-203ENST00000585370 CCDC195A0A1B0GUA6 201 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 TYW5A2RUC4 315 aaKnown RBP10.56□□□□□ -0.72
LIG3-203ENST00000585370 KRT37O76014 449 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 CNTN5O94779 1100 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 C8AP07357 584 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 SPATA31D3P0C874 917 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 KRT15P19012 456 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 GCAP28676 217 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 CORO1AP31146 461 aaKnown RBP10.56□□□□□ -0.72
LIG3-203ENST00000585370 HOXA9P31269 272 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 SLC7A9P82251 487 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 DNAJC3Q13217 504 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 ZNF177Q13360 481 aaPredicted RBP10.56□□□□□ -0.72
LIG3-203ENST00000585370 TDGQ13569 410 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 SLC14A2Q15849 920 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 GLIPR1L2Q4G1C9 344 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 ALFQ53S48 1182 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 FAM133BQ5BKY9 247 aaKnown RBP10.56□□□□□ -0.72
LIG3-203ENST00000585370 PPM1LQ5SGD2 360 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 CASC4Q6P4E1 433 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 UNC5AQ6ZN44 842 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 SPATA31D4Q6ZUB0 917 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 TFAP2DQ7Z6R9 452 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 TRABD2AQ86V40 505 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 DNAAF3Q8N9W5 541 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 NETO2Q8NC67 525 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 DEPDC1BQ8WUY9 529 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 HMCESQ96FZ2 354 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 SGSM3Q96HU1 749 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 SMC6Q96SB8 1091 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 PAFAH2Q99487 392 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 SELENOSQ9BQE4 189 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 CEP41Q9BYV8 373 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 RNF38Q9H0F5 515 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 EPN3Q9H201 632 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 NDFIP2Q9NV92 336 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 NKIRAS1Q9NYS0 192 aa10.56□□□□□ -0.72
LIG3-203ENST00000585370 AGO1Q9UL18 857 aaKnown RBP10.56□□□□□ -0.72
LIG3-203ENST00000585370 DNAH14Q0VDD8 3507 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 TRAV19A0A0A6YYK7 116 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms