RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 CNTN6Q9UQ52 1028 aa10.99□□□□□ -0.65
CSNK1D-226ENST00000585026 GCN1Q92616 2671 aaKnown RBP10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 SYNJ2BP-COX16A0A087WUM0 186 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 A6NNZ2 444 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 H3BM21 787 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 SCAMP1O15126 338 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 ARHGAP6O43182 974 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 HSF2BPO75031 334 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 USP12O75317 370 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 PCDH8O95206 1070 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 MPOP05164 745 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 PRLRP16471 622 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 SLC9A1P19634 815 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 RBMS1P29558 406 aaKnown RBP10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 GNA15P30679 374 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 CHRNA3P32297 505 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 CLCN6P51797 869 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 CDH4P55283 916 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 AUHQ13825 339 aaKnown RBP10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 ACBD5Q5T8D3 534 aaPredicted RBP10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 CDCP2Q5VXM1 449 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 DENND1BQ6P3S1 775 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 TRIM65Q6PJ69 517 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 LRRC31Q6UY01 552 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 CIR1Q86X95 450 aaPredicted RBP10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 ARHGEF19Q8IW93 802 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 DEFB106AQ8N104 65 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 FAM181AQ8N9Y4 354 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 ATP11CQ8NB49 1132 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 TPCN2Q8NHX9 752 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 MAPK15Q8TD08 544 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 CPLX3Q8WVH0 158 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 ALG14Q96F25 216 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 NAF1Q96HR8 494 aaKnown RBP10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 HIC2Q96JB3 615 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 PCMTD1Q96MG8 357 aaPredicted RBP10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 MYOCQ99972 504 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 SIX2Q9NPC8 291 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 UBE2TQ9NPD8 197 aaPredicted RBP10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 FAM207AQ9NSI2 230 aaPredicted RBP10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 RRN3Q9NYV6 651 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 COX16Q9P0S2 106 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 VANGL2Q9ULK5 521 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 HS3ST2Q9Y278 367 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 TBC1D30Q9Y2I9 924 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 PAXBP1Q9Y5B6 917 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 PCDHB1Q9Y5F3 818 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 HS3ST3A1Q9Y663 406 aa10.98□□□□□ -0.65
CSNK1D-226ENST00000585026 SMG1Q96Q15 3661 aaKnown RBP10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 EPHB6O15197 1021 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 KLK10O43240 276 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 ZNF500O60304 480 aaPredicted RBP10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 CSO75390 466 aaKnown RBP10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 CALCAP01258 141 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 RHOCP08134 193 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 UCHL3P15374 230 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 NUMBP49757 651 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 METAP1P53582 386 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 TAS2R38P59533 333 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 NME3Q13232 169 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 PDCLQ13371 301 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 EIF4EBP2Q13542 120 aaPredicted RBP10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 TSR1Q2NL82 804 aaKnown RBP10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 ZNF284Q2VY69 593 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 PIP5KL1Q5T9C9 394 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 ARHGAP40Q5TG30 622 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 KIAA1161Q6NSJ0 714 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 ZCCHC8Q6NZY4 707 aaKnown RBP10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 WDR59Q6PJI9 974 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 ERN2Q76MJ5 926 aaKnown RBP10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 OR13H1Q8NG92 308 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 GLMNQ92990 594 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 FEM1CQ96JP0 617 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 APOLD1Q96LR9 279 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 KREMEN1Q96MU8 473 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 SLC2A13Q96QE2 648 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 CRACR2AQ9BSW2 395 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 INTS2Q9H0H0 1204 aaKnown RBP10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 UCKL1Q9NWZ5 548 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 DNAJC28Q9NX36 388 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 AIPL1Q9NZN9 384 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 IPO11Q9UI26 975 aaKnown RBP10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 CA5BQ9Y2D0 317 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 OR51B4Q9Y5P0 310 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 PLXNA2O75051 1894 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 SHROOM3Q8TF72 1996 aa10.97□□□□□ -0.65
CSNK1D-226ENST00000585026 LOC400499M0QZD8 3231 aa10.96□□□□□ -0.65
CSNK1D-226ENST00000585026 PAGE1O75459 146 aa10.96□□□□□ -0.65
CSNK1D-226ENST00000585026 F9P00740 461 aa10.96□□□□□ -0.65
CSNK1D-226ENST00000585026 SRCP12931 536 aa10.96□□□□□ -0.65
CSNK1D-226ENST00000585026 MSNP26038 577 aaKnown RBP10.96□□□□□ -0.65
CSNK1D-226ENST00000585026 RPIAP49247 311 aa10.96□□□□□ -0.65
CSNK1D-226ENST00000585026 NEK3P51956 506 aa10.96□□□□□ -0.65
CSNK1D-226ENST00000585026 RPS21P63220 83 aaKnown RBP10.96□□□□□ -0.65
CSNK1D-226ENST00000585026 PITX1P78337 314 aaPredicted RBP10.96□□□□□ -0.65
CSNK1D-226ENST00000585026 CENPCQ03188 943 aa10.96□□□□□ -0.65
CSNK1D-226ENST00000585026 SLC20A2Q08357 652 aa10.96□□□□□ -0.65
CSNK1D-226ENST00000585026 VAC14Q08AM6 782 aa10.96□□□□□ -0.65
CSNK1D-226ENST00000585026 RETSATQ6NUM9 610 aa10.96□□□□□ -0.65
CSNK1D-226ENST00000585026 IGF2-ASQ6U949 168 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms