RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 IL1RL2Q9HB29 575 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 DNAJC16Q9Y2G8 782 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 ARHGAP10A1A4S6 786 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 TEX28O15482 410 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 COCHO43405 550 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 HSPA4LO95757 839 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 F9P00740 461 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 RHOCP08134 193 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 GSTA1P08263 222 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 ITGA2BP08514 1039 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 GSTA2P09210 222 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 SEMA5AQ13591 1074 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 TRIM68Q6AZZ1 485 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 ZNF534Q76KX8 674 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 SH3RF2Q8TEC5 729 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 TCEAL4Q96EI5 215 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 MYCBPQ99417 103 aaPredicted RBP10.43□□□□□ -0.74
RFFL-212ENST00000584655 MYLK2Q9H1R3 596 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 CATSPERBQ9H7T0 1116 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 CLEC4EQ9ULY5 219 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 PTPRZ1P23471 2315 aaPredicted RBP10.43□□□□□ -0.74
RFFL-212ENST00000584655 BPTFQ12830 3046 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 TLL1O43897 1013 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 SNX3O60493 162 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 SLC6A4P31645 630 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 ARSDP51689 593 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 ARFIP2P53365 341 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 BZW1Q7L1Q6 419 aaKnown RBP10.43□□□□□ -0.74
RFFL-212ENST00000584655 STK32AQ8WU08 396 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 DNAJC1Q96KC8 554 aaKnown RBP10.43□□□□□ -0.74
RFFL-212ENST00000584655 SERPINB11Q96P15 392 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 OSBPL1AQ9BXW6 950 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 CFAP97Q9P2B7 532 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 GIMAP2Q9UG22 337 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 PCDHB8Q9UN66 801 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 HCFC2Q9Y5Z7 792 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.43□□□□□ -0.74
RFFL-212ENST00000584655 MUSKO15146 869 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 CABYRO75952 493 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 BAG2O95816 211 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 KLKB1P03952 638 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 CHRNGP07510 517 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 TROVE2P10155 538 aaKnown RBP eCLIP10.43□□□□□ -0.74
RFFL-212ENST00000584655 SCTRP47872 440 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 CLNS1AP54105 237 aaKnown RBP10.43□□□□□ -0.74
RFFL-212ENST00000584655 ZNF177Q13360 481 aaPredicted RBP10.43□□□□□ -0.74
RFFL-212ENST00000584655 ANKRD20A4Q4UJ75 823 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 TTC39BQ5VTQ0 682 aaPredicted RBP10.43□□□□□ -0.74
RFFL-212ENST00000584655 CAMK1DQ8IU85 385 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 REM2Q8IYK8 340 aaPredicted RBP10.43□□□□□ -0.74
RFFL-212ENST00000584655 KLHL23Q8NBE8 558 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 ZNF558Q96NG5 402 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 MYOCQ99972 504 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 TCF25Q9BQ70 676 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 ROPN1BQ9BZX4 212 aaPredicted RBP10.43□□□□□ -0.74
RFFL-212ENST00000584655 ROPN1Q9HAT0 212 aaPredicted RBP10.43□□□□□ -0.74
RFFL-212ENST00000584655 DSEQ9UL01 958 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 PLA2G4CQ9UP65 541 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 ARID2Q68CP9 1835 aa10.43□□□□□ -0.74
RFFL-212ENST00000584655 LRRC14BA6NHZ5 514 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 CCT8L1PA6NM43 557 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 DCLK1O15075 740 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 GUCA1CO95843 209 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 FMO4P31512 558 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 PIK3CGP48736 1102 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 ACAP1Q15027 740 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 SGO1Q5FBB7 561 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 FSTL4Q6MZW2 842 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 PACS1Q6VY07 963 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 NLRP9Q7RTR0 991 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 N4BP2L2Q92802 583 aaPredicted RBP10.42□□□□□ -0.74
RFFL-212ENST00000584655 E2F7Q96AV8 911 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 CLSTN3Q9BQT9 956 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 C20orf27Q9GZN8 174 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 PIF1Q9H611 641 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 KANSL3Q9P2N6 904 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 EVLQ9UI08 416 aaPredicted RBP10.42□□□□□ -0.74
RFFL-212ENST00000584655 ZFP69BQ9UJL9 534 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 SLC4A7Q9Y6M7 1214 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 BCLAF3A2AJT9 711 aaKnown RBP10.42□□□□□ -0.74
RFFL-212ENST00000584655 INPPL1O15357 1258 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 LRG1P02750 347 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 PARP6Q2NL67 630 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 PLEKHG4Q58EX7 1191 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 HECTD3Q5T447 861 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 TEKT4Q8WW24 435 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 CKAP2Q8WWK9 683 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 TMEM120AQ9BXJ8 343 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 NUF2Q9BZD4 464 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 ARHGEF38Q9NXL2 777 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 CCL26Q9Y258 94 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 AK5Q9Y6K8 562 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 TRIM43BA6NCK2 446 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 NRG2O14511 850 aaPredicted RBP10.42□□□□□ -0.74
RFFL-212ENST00000584655 CLGNO14967 610 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 CHADO15335 359 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 OPHN1O60890 802 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 SERPINB5P36952 375 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 NIPAL4Q0D2K0 466 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 DPYSQ14117 519 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms