RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 METTL5Q9NRN9 209 aaKnown RBP16.02■□□□□ 0.16
SKA2-209ENST00000583976 ASNSD1Q9NWL6 643 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 PPM1HQ9ULR3 514 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 KNTC1P50748 2209 aa16.02■□□□□ 0.15
SKA2-209ENST00000583976 A0A087X0T9 212 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 M0QYT0 321 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 TRIM38O00635 465 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 SLC7A4O43246 635 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 FTLP02792 175 aaPredicted RBP16.01■□□□□ 0.15
SKA2-209ENST00000583976 GLI1P08151 1106 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 FAM228BP0C875 321 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 RRM1P23921 792 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 RXRGP48443 463 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 PROX2Q3B8N5 592 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 C6orf118Q5T5N4 469 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 LINGO4Q6UY18 593 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 TFAP2DQ7Z6R9 452 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 DSG4Q86SJ6 1040 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 ZNF683Q8IZ20 524 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 MCOLN2Q8IZK6 566 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 OXR1Q8N573 874 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 TMEM145Q8NBT3 493 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 CHST14Q8NCH0 376 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 GRIN3AQ8TCU5 1115 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 ARRDC3Q96B67 414 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 SIK2Q9H0K1 926 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 MUC3BQ9H195 1237 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 DEF6Q9H4E7 631 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 ERVMER34-1Q9H9K5 563 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 GRPEL1Q9HAV7 217 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 UCKL1Q9NWZ5 548 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 SLC12A6Q9UHW9 1150 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 VPS51Q9UID3 782 aa16.01■□□□□ 0.15
SKA2-209ENST00000583976 ASXL3Q9C0F0 2248 aa16■□□□□ 0.15
SKA2-209ENST00000583976 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16■□□□□ 0.15
SKA2-209ENST00000583976 MCF2LO15068 1137 aa16■□□□□ 0.15
SKA2-209ENST00000583976 SLC31A1O15431 190 aa16■□□□□ 0.15
SKA2-209ENST00000583976 RNGTTO60942 597 aaKnown RBP16■□□□□ 0.15
SKA2-209ENST00000583976 PRB1P04280 392 aa16■□□□□ 0.15
SKA2-209ENST00000583976 RHOCP08134 193 aa16■□□□□ 0.15
SKA2-209ENST00000583976 SLC2A3P11169 496 aa16■□□□□ 0.15
SKA2-209ENST00000583976 GZMAP12544 262 aa16■□□□□ 0.15
SKA2-209ENST00000583976 GLDCP23378 1020 aa16■□□□□ 0.15
SKA2-209ENST00000583976 C1QBPQ07021 282 aaKnown RBP16■□□□□ 0.15
SKA2-209ENST00000583976 ZNF177Q13360 481 aaPredicted RBP16■□□□□ 0.15
SKA2-209ENST00000583976 SETMARQ53H47 684 aaPredicted RBP16■□□□□ 0.15
SKA2-209ENST00000583976 CCDC122Q5T0U0 273 aa16■□□□□ 0.15
SKA2-209ENST00000583976 FAM46CQ5VWP2 391 aa16■□□□□ 0.15
SKA2-209ENST00000583976 EMC1Q8N766 993 aa16■□□□□ 0.15
SKA2-209ENST00000583976 SELENOOQ9BVL4 669 aa16■□□□□ 0.15
SKA2-209ENST00000583976 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16■□□□□ 0.15
SKA2-209ENST00000583976 DMTF1Q9Y222 760 aa16■□□□□ 0.15
SKA2-209ENST00000583976 HS3ST2Q9Y278 367 aa16■□□□□ 0.15
SKA2-209ENST00000583976 A0A0D9SEW6 157 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 A0A1W2PQU0 124 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 KPNA3O00505 521 aaPredicted RBP15.99■□□□□ 0.15
SKA2-209ENST00000583976 ALOX15BO15296 676 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 FFAR2O15552 330 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 ATMINO43313 823 aaPredicted RBP15.99■□□□□ 0.15
SKA2-209ENST00000583976 SMAD6O43541 496 aaKnown RBP15.99■□□□□ 0.15
SKA2-209ENST00000583976 SIGLEC6O43699 453 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 MYF5P13349 255 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 CDC25BP30305 580 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 NOS2P35228 1153 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 FLT3P36888 993 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 SULT1E1P49888 294 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 VASPP50552 380 aaPredicted RBP15.99■□□□□ 0.15
SKA2-209ENST00000583976 CLDN2P57739 230 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 INSM1Q01101 510 aaPredicted RBP15.99■□□□□ 0.15
SKA2-209ENST00000583976 ARTNQ5T4W7 220 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 SEL1L3Q68CR1 1132 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 C22orf39Q6P5X5 142 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 ALKBH5Q6P6C2 394 aaKnown RBP15.99■□□□□ 0.15
SKA2-209ENST00000583976 SLC22A18ASQ8N1D0 253 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 OR2A12Q8NGT7 310 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 JOSD2Q8TAC2 188 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 TKTL2Q9H0I9 626 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 TNKS2Q9H2K2 1166 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 KDM4CQ9H3R0 1056 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 NHEJ1Q9H9Q4 299 aaPredicted RBP15.99■□□□□ 0.15
SKA2-209ENST00000583976 PREBQ9HCU5 417 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 MYO1AQ9UBC5 1043 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 TMEM59LQ9UK28 342 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 TPX2Q9ULW0 747 aaKnown RBP15.99■□□□□ 0.15
SKA2-209ENST00000583976 TBC1D30Q9Y2I9 924 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 AK5Q9Y6K8 562 aa15.99■□□□□ 0.15
SKA2-209ENST00000583976 MGAQ8IWI9 3026 aa15.98■□□□□ 0.15
SKA2-209ENST00000583976 TDRD6O60522 2096 aaKnown RBP15.98■□□□□ 0.15
SKA2-209ENST00000583976 E9PAM4 449 aa15.98■□□□□ 0.15
SKA2-209ENST00000583976 PRAMEF26H0Y7S4 382 aa15.98■□□□□ 0.15
SKA2-209ENST00000583976 AKR1B10O60218 316 aa15.98■□□□□ 0.15
SKA2-209ENST00000583976 BRINP1O60477 761 aa15.98■□□□□ 0.15
SKA2-209ENST00000583976 CLDN11O75508 207 aa15.98■□□□□ 0.15
SKA2-209ENST00000583976 THEGLP0DJG4 465 aa15.98■□□□□ 0.15
SKA2-209ENST00000583976 KRT3P12035 628 aa15.98■□□□□ 0.15
SKA2-209ENST00000583976 CKMT2P17540 419 aa15.98■□□□□ 0.15
SKA2-209ENST00000583976 SCNN1AP37088 669 aa15.98■□□□□ 0.15
SKA2-209ENST00000583976 CDH4P55283 916 aa15.98■□□□□ 0.15
SKA2-209ENST00000583976 OXCT1P55809 520 aa15.98■□□□□ 0.15
SKA2-209ENST00000583976 MAPK8IP2Q13387 824 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms