RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 TRIM51Q9BSJ1 452 aa16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 CEP41Q9BYV8 373 aa16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 MFSD1Q9H3U5 465 aa16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 PAK5Q9P286 719 aa16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 KLHL8Q9P2G9 620 aaPredicted RBP16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 SEPT3Q9UH03 358 aa16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ERVW-1Q9UQF0 538 aa16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 HS3ST2Q9Y278 367 aa16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 PIAS3Q9Y6X2 628 aa16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 TICRRQ7Z2Z1 1910 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 BHMG1C9JSJ3 638 aaPredicted RBP16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 K7ERQ8 282 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 HLA-DQB2P05538 268 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 SRPRAP08240 638 aaKnown RBP16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 DLDP09622 509 aaKnown RBP16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 IVDP26440 423 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ACTN2P35609 894 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 TNFRSF4P43489 277 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 SERPINH1P50454 418 aaKnown RBP16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 EIF4HQ15056 248 aaKnown RBP16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 PTPRNQ16849 979 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 PARP6Q2NL67 630 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 CCDC70Q6NSX1 233 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 NUDT18Q6ZVK8 323 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 METTL3Q86U44 580 aaKnown RBP16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 SFTPA1Q8IWL2 248 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 BBS5Q8N3I7 341 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 PGBD5Q8N414 524 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 CCHCR1Q8TD31 782 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 CYB5D2Q8WUJ1 264 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 SORCS1Q8WY21 1168 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 EXOC4Q96A65 974 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 MSANTD3Q96H12 275 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 RPL10LQ96L21 214 aaKnown RBP16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 MRGPRX3Q96LB0 322 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 PSKH2Q96QS6 385 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 CIPCQ9C0C6 399 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 GLOD4Q9HC38 313 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 NT5MQ9NPB1 228 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 DMGDHQ9UI17 866 aaKnown RBP16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 SLCO3A1Q9UIG8 710 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 SLC25A13Q9UJS0 675 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 STARD13Q9Y3M8 1113 aa16.62■□□□□ 0.25
CDK5RAP3-228ENST00000583363 DCHS1Q96JQ0 3298 aa16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 MIA3Q5JRA6 1907 aa16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 SHISA7A6NL88 538 aa16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 SMAD6O43541 496 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ZNF821O75541 412 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 TMCC1O94876 653 aa16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 METTL18O95568 372 aa16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 RHOXF2BP0C7M4 288 aa16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 SRCP12931 536 aa16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 STK19P49842 368 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 DRG2P55039 364 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 NSUN2Q08J23 767 aaKnown RBP eCLIP16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 GPS1Q13098 491 aa16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 TMEM196Q5HYL7 178 aa16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 DUPD1Q68J44 220 aa16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ARHGEF18Q6ZSZ5 1173 aa16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 SH2D3CQ8N5H7 860 aa16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ATP11CQ8NB49 1132 aa16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 TSEN2Q8NCE0 465 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 FLCNQ8NFG4 579 aa16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 UBXN4Q92575 508 aa16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 RHOXF2Q9BQY4 288 aa16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 CINPQ9BW66 212 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 RAB17Q9H0T7 212 aa16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 HCN2Q9UL51 889 aa16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 PLA2G4CQ9UP65 541 aa16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 FCF1Q9Y324 198 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 UTP11Q9Y3A2 253 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 COL4A3Q01955 1670 aa16.61■□□□□ 0.25
CDK5RAP3-228ENST00000583363 COL4A2P08572 1712 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 K7EQS6 105 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 MUSKO15146 869 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 PI15O43692 258 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ATP9BO43861 1147 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 NEBLO76041 1014 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 HEXIM1O94992 359 aaKnown RBP16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 HSPA9P38646 679 aaKnown RBP16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ADCY8P40145 1251 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 VPS41P49754 854 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ZNF235Q14590 738 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 PON2Q15165 354 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 DGKKQ5KSL6 1271 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ITPRIPL1Q6GPH6 555 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 KDM1BQ8NB78 822 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 UCMAQ8WVF2 138 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 SEC14L1Q92503 715 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 EZH1Q92800 747 aaPredicted RBP16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ISG20Q96AZ6 181 aaKnown RBP16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 LRRC45Q96CN5 670 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 MYO19Q96H55 970 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 FCRL5Q96RD9 977 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 HINFPQ9BQA5 517 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 MGME1Q9BQP7 344 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 CEP44Q9C0F1 390 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 SLC25A51Q9H1U9 297 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ETNK1Q9HBU6 452 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms