RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 NSMCE3Q96MG7 304 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 SPATA13Q96N96 652 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 PSKH2Q96QS6 385 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 UHRF1Q96T88 793 aaPredicted RBP9.69□□□□□ -0.86
RFFL-210ENST00000582308 VAT1Q99536 393 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 TNKS2Q9H2K2 1166 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 TMEM245Q9H330 911 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 KLHL8Q9P2G9 620 aaPredicted RBP9.69□□□□□ -0.86
RFFL-210ENST00000582308 SEPT3Q9UH03 358 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 TRHDEQ9UKU6 1024 aa9.69□□□□□ -0.86
RFFL-210ENST00000582308 MTF2Q9Y483 593 aaPredicted RBP9.69□□□□□ -0.86
RFFL-210ENST00000582308 KANSL1LA0AUZ9 987 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 TTC24A2A3L6 582 aaPredicted RBP9.68□□□□□ -0.86
RFFL-210ENST00000582308 RIOK3O14730 519 aaKnown RBP9.68□□□□□ -0.86
RFFL-210ENST00000582308 ZNF189O75820 626 aaPredicted RBP9.68□□□□□ -0.86
RFFL-210ENST00000582308 STK10O94804 968 aaKnown RBP9.68□□□□□ -0.86
RFFL-210ENST00000582308 ECEL1O95672 775 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 KRT14P02533 472 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 CHRNB1P11230 501 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 HLA-EP13747 358 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 CR2P20023 1033 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 PRKCHP24723 683 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 NNMTP40261 264 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 IL12RB1P42701 662 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 MAXP61244 160 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 RHOAP61586 193 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 DSC2Q02487 901 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 NIPAL4Q0D2K0 466 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 ENPP2Q13822 863 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 DHX34Q14147 1143 aaKnown RBP9.68□□□□□ -0.86
RFFL-210ENST00000582308 ZNF235Q14590 738 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 P3H1Q32P28 736 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 ACCSLQ4AC99 568 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 C2orf27AQ580R0 203 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 ATXN7L2Q5T6C5 722 aaPredicted RBP9.68□□□□□ -0.86
RFFL-210ENST00000582308 ALG1LQ6GMV1 187 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 C22orf39Q6P5X5 142 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 Q6ZVU0 165 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 METTL3Q86U44 580 aaKnown RBP9.68□□□□□ -0.86
RFFL-210ENST00000582308 JAMLQ86YT9 394 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.68□□□□□ -0.86
RFFL-210ENST00000582308 ZNF513Q8N8E2 541 aaPredicted RBP9.68□□□□□ -0.86
RFFL-210ENST00000582308 CCDC89Q8N998 374 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 KDM1BQ8NB78 822 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 CCDC26Q8TAB7 109 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 KCNV2Q8TDN2 545 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 VOPP1Q96AW1 172 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 EXOC2Q96KP1 924 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 RUNDC3BQ96NL0 473 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 FERMT1Q9BQL6 677 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 MGME1Q9BQP7 344 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 TRIM51Q9BSJ1 452 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 LRRC1Q9BTT6 524 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 CINPQ9BW66 212 aaPredicted RBP9.68□□□□□ -0.86
RFFL-210ENST00000582308 TM6SF2Q9BZW4 377 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 FOXQ1Q9C009 403 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 CEP44Q9C0F1 390 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 MTG2Q9H4K7 406 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 TBC1D17Q9HA65 648 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 GLOD4Q9HC38 313 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 PCDH9Q9HC56 1237 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 LTB4R2Q9NPC1 389 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 CACNA2D2Q9NY47 1150 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 STON1Q9Y6Q2 735 aa9.68□□□□□ -0.86
RFFL-210ENST00000582308 CACNA1IQ9P0X4 2223 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 FAM187AA6NFU0 413 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 FAM170BA6NMN3 283 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 F5H423 210 aaPredicted RBP9.67□□□□□ -0.86
RFFL-210ENST00000582308 NPC1O15118 1278 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 INSIG1O15503 277 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 ADAM23O75077 832 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 RNF40O75150 1001 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 NEBLO76041 1014 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 SLU7O95391 586 aaKnown RBP9.67□□□□□ -0.86
RFFL-210ENST00000582308 METTL18O95568 372 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 KLF8O95600 359 aaPredicted RBP9.67□□□□□ -0.86
RFFL-210ENST00000582308 GAS8O95995 478 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 MMP2P08253 660 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 NFKB1P19838 968 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 IVDP26440 423 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 PSMB4P28070 264 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 NTSR1P30989 418 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 HSPA9P38646 679 aaKnown RBP9.67□□□□□ -0.86
RFFL-210ENST00000582308 WASP42768 502 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 CSNK1DP48730 415 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 VPS41P49754 854 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 ST8SIA6P61647 398 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 MRPS21P82921 87 aaKnown RBP9.67□□□□□ -0.86
RFFL-210ENST00000582308 ITKQ08881 620 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 NSUN2Q08J23 767 aaKnown RBP eCLIP9.67□□□□□ -0.86
RFFL-210ENST00000582308 PTK6Q13882 451 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 UBXN2BQ14CS0 331 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 PPP1R7Q15435 360 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 HNRNPA1L2Q32P51 320 aaKnown RBP9.67□□□□□ -0.86
RFFL-210ENST00000582308 FBXO43Q4G163 708 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 CARD16Q5EG05 197 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 C9orf64Q5T6V5 341 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 PKN3Q6P5Z2 889 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 SERPINA13PQ6UXR4 307 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 ARHGEF18Q6ZSZ5 1173 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms