RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 KLHDC10Q6PID8 442 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 NUDCD3Q8IVD9 361 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 ISL2Q96A47 359 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 E2F7Q96AV8 911 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 ZNF512Q96ME7 567 aaPredicted RBP22.99■■□□□ 1.27
CCDC47-204ENST00000582252 ALG13Q9NP73 1137 aaKnown RBP22.99■■□□□ 1.27
CCDC47-204ENST00000582252 SLC17A6Q9P2U8 582 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 PSAT1Q9Y617 370 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 RANBP2P49792 3224 aaKnown RBP22.99■■□□□ 1.27
CCDC47-204ENST00000582252 CNTN5O94779 1100 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 UBOX5O94941 541 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 ALDOAP04075 364 aaKnown RBP22.99■■□□□ 1.27
CCDC47-204ENST00000582252 TYK2P29597 1187 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 SLC11A2P49281 568 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 HARS2P49590 506 aaKnown RBP22.99■■□□□ 1.27
CCDC47-204ENST00000582252 TNK2Q07912 1038 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 GALNTL6Q49A17 601 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 HSP90AA5PQ58FG0 334 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 FAM133BQ5BKY9 247 aaKnown RBP22.99■■□□□ 1.27
CCDC47-204ENST00000582252 C10orf82Q8WW14 230 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 IGSF8Q969P0 613 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 RMDN2Q96LZ7 410 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 PRKD2Q9BZL6 878 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 SIRPGQ9P1W8 387 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 PDE4DIPQ5VU43 2346 aa22.98■■□□□ 1.27
CCDC47-204ENST00000582252 MIA3Q5JRA6 1907 aa22.98■■□□□ 1.27
CCDC47-204ENST00000582252 C2CD2LO14523 706 aa22.98■■□□□ 1.27
CCDC47-204ENST00000582252 ADAM12O43184 909 aa22.98■■□□□ 1.27
CCDC47-204ENST00000582252 MPOP05164 745 aa22.98■■□□□ 1.27
CCDC47-204ENST00000582252 SHHQ15465 462 aa22.98■■□□□ 1.27
CCDC47-204ENST00000582252 UGP2Q16851 508 aa22.98■■□□□ 1.27
CCDC47-204ENST00000582252 HECTD3Q5T447 861 aa22.98■■□□□ 1.27
CCDC47-204ENST00000582252 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.98■■□□□ 1.27
CCDC47-204ENST00000582252 TEX26Q8N6G2 289 aa22.98■■□□□ 1.27
CCDC47-204ENST00000582252 ZNF461Q8TAF7 563 aa22.98■■□□□ 1.27
CCDC47-204ENST00000582252 GABPB2Q8TAK5 448 aaPredicted RBP22.98■■□□□ 1.27
CCDC47-204ENST00000582252 PTPRN2Q92932 1015 aa22.98■■□□□ 1.27
CCDC47-204ENST00000582252 PLD4Q96BZ4 506 aa22.98■■□□□ 1.27
CCDC47-204ENST00000582252 NPHS2Q9NP85 383 aa22.98■■□□□ 1.27
CCDC47-204ENST00000582252 NT5MQ9NPB1 228 aa22.98■■□□□ 1.27
CCDC47-204ENST00000582252 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.98■■□□□ 1.27
CCDC47-204ENST00000582252 MRPL17Q9NRX2 175 aaKnown RBP22.98■■□□□ 1.27
CCDC47-204ENST00000582252 SSX2IPQ9Y2D8 614 aa22.98■■□□□ 1.27
CCDC47-204ENST00000582252 ACSL4O60488 711 aa22.97■■□□□ 1.27
CCDC47-204ENST00000582252 PMPCBO75439 489 aa22.97■■□□□ 1.27
CCDC47-204ENST00000582252 BPGMP07738 259 aa22.97■■□□□ 1.27
CCDC47-204ENST00000582252 NMBRP28336 390 aa22.97■■□□□ 1.27
CCDC47-204ENST00000582252 OR1E1P30953 314 aa22.97■■□□□ 1.27
CCDC47-204ENST00000582252 CTNNB1P35222 781 aa22.97■■□□□ 1.27
CCDC47-204ENST00000582252 BMPR1AP36894 532 aa22.97■■□□□ 1.27
CCDC47-204ENST00000582252 ALDH1A3P47895 512 aa22.97■■□□□ 1.27
CCDC47-204ENST00000582252 TMPRSS15P98073 1019 aa22.97■■□□□ 1.27
CCDC47-204ENST00000582252 CREMQ03060 361 aa22.97■■□□□ 1.27
CCDC47-204ENST00000582252 PDE1CQ14123 709 aaPredicted RBP22.97■■□□□ 1.27
CCDC47-204ENST00000582252 TAF12Q16514 161 aa22.97■■□□□ 1.27
CCDC47-204ENST00000582252 SPRED3Q2MJR0 410 aa22.97■■□□□ 1.27
CCDC47-204ENST00000582252 FITM2Q8N6M3 262 aa22.97■■□□□ 1.27
CCDC47-204ENST00000582252 KLHL23Q8NBE8 558 aa22.97■■□□□ 1.27
CCDC47-204ENST00000582252 IMP4Q96G21 291 aaKnown RBP22.97■■□□□ 1.27
CCDC47-204ENST00000582252 LRRC37BQ96QE4 947 aa22.97■■□□□ 1.27
CCDC47-204ENST00000582252 TRPM5Q9NZQ8 1165 aa22.97■■□□□ 1.27
CCDC47-204ENST00000582252 TCAF1Q9Y4C2 921 aa22.97■■□□□ 1.27
CCDC47-204ENST00000582252 LINC01553A4QN01 128 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 CFAP73A6NFT4 308 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 ATP5HO75947 161 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 PEX11BO96011 259 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 RPL17P18621 184 aaKnown RBP22.96■■□□□ 1.27
CCDC47-204ENST00000582252 SKIV2L2P42285 1042 aaKnown RBP22.96■■□□□ 1.27
CCDC47-204ENST00000582252 MAGEA12P43365 314 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 ITKQ08881 620 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 BNIP1Q12981 228 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 VEPH1Q14D04 833 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 C5orf22Q49AR2 442 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 SPDYAQ5MJ70 313 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 RABGAP1LQ5R372 815 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 RANBP10Q6VN20 620 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 DCLK2Q8N568 766 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 PABPC5Q96DU9 382 aaKnown RBP22.96■■□□□ 1.27
CCDC47-204ENST00000582252 ZNF419Q96HQ0 510 aaPredicted RBP22.96■■□□□ 1.27
CCDC47-204ENST00000582252 MRGPRX2Q96LB1 330 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 C7orf26Q96N11 449 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 CLSTN3Q9BQT9 956 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 ZBP1Q9H171 429 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 IARS2Q9NSE4 1012 aaKnown RBP22.96■■□□□ 1.27
CCDC47-204ENST00000582252 IL1RAPL1Q9NZN1 696 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 ABLIM3O94929 683 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 PPP3CCP48454 512 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 WNT3AP56704 352 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 SERINC3Q13530 473 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 POU6F1Q14863 301 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 CCDC153Q494R4 210 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 DENND5AQ6IQ26 1287 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 LGI2Q8N0V4 545 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 AZIN2Q96A70 460 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 THOC1Q96FV9 657 aaKnown RBP22.96■■□□□ 1.27
CCDC47-204ENST00000582252 ARNT2Q9HBZ2 717 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 SNX15Q9NRS6 342 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 ZNF212Q9UDV6 495 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 LZTS1Q9Y250 596 aa22.96■■□□□ 1.27
CCDC47-204ENST00000582252 ZNF840PA6NDX5 716 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms