RNA–Protein interactions for RNA: ENST00000581733.1

TVP23B-209, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5 BASIC

Gene TVP23B, Length 1,258 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-209ENST00000581733 CASP8Q14790 479 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 TAZQ16635 292 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 C15orf59Q2T9L4 293 aaPredicted RBP6.7□□□□□ -1.34
TVP23B-209ENST00000581733 SMTNL2Q2TAL5 461 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 SLC25A52Q3SY17 297 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 CCDC14Q49A88 953 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 CTXN3Q4LDR2 81 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 RAB41Q5JT25 222 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 FAM209AQ5JX71 171 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 ERMARDQ5T6L9 678 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 DAB2IPQ5VWQ8 1189 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 KAZNQ674X7 775 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 DUPD1Q68J44 220 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 SCYL2Q6P3W7 929 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 VSTM1Q6UX27 236 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 CD300LGQ6UXG3 332 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 PAQR9Q6ZVX9 377 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 BBS12Q6ZW61 710 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 GSTA5Q7RTV2 222 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 DEFB128Q7Z7B8 93 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 ZNF280BQ86YH2 543 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 RFX6Q8HWS3 928 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 KRT222Q8N1A0 295 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 ARHGAP18Q8N392 663 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 MREGQ8N565 214 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 CCDC89Q8N998 374 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 CMASQ8NFW8 434 aaPredicted RBP6.7□□□□□ -1.34
TVP23B-209ENST00000581733 C2orf15Q8WU43 125 aaKnown RBP6.7□□□□□ -1.34
TVP23B-209ENST00000581733 HDAC7Q8WUI4 952 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 C1orf54Q8WWF1 131 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 CASKIN2Q8WXE0 1202 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 SEC14L1Q92503 715 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 CENPIQ92674 756 aaPredicted RBP6.7□□□□□ -1.34
TVP23B-209ENST00000581733 HAUS1Q96CS2 278 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 SNF8Q96H20 258 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 CFAP57Q96MR6 1250 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 FCRL3Q96P31 734 aaPredicted RBP6.7□□□□□ -1.34
TVP23B-209ENST00000581733 SLC2A13Q96QE2 648 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 SMOQ99835 787 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 RTP3Q9BQQ7 232 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 ZNF670Q9BS34 389 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 TRIM51Q9BSJ1 452 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 IER2Q9BTL4 223 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 HEMGNQ9BXL5 484 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 SLC12A9Q9BXP2 914 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 CALN1Q9BXU9 219 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 FUT8Q9BYC5 575 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 ZCWPW1Q9H0M4 648 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 DPH5Q9H2P9 285 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 NRDE2Q9H7Z3 1164 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.7□□□□□ -1.34
TVP23B-209ENST00000581733 KLHL11Q9NVR0 708 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 OGFRQ9NZT2 677 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 RCOR3Q9P2K3 495 aaPredicted RBP6.7□□□□□ -1.34
TVP23B-209ENST00000581733 DNAJB4Q9UDY4 337 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 ASIC3Q9UHC3 531 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 PCSK1NQ9UHG2 260 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 NFU1Q9UMS0 254 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 DRG1Q9Y295 367 aaKnown RBP6.7□□□□□ -1.34
TVP23B-209ENST00000581733 GPR55Q9Y2T6 319 aaPredicted RBP6.7□□□□□ -1.34
TVP23B-209ENST00000581733 COL4A6Q14031 1691 aa6.7□□□□□ -1.34
TVP23B-209ENST00000581733 MYO18AQ92614 2054 aaKnown RBP6.7□□□□□ -1.34
TVP23B-209ENST00000581733 KIAA0100Q14667 2235 aaKnown RBP6.69□□□□□ -1.34
TVP23B-209ENST00000581733 NUP205Q92621 2012 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.69□□□□□ -1.34
TVP23B-209ENST00000581733 TCRBV7S2A1N4TA0A589 114 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 CFAP69A5D8W1 941 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 APOC4-APOC2K7ER74 178 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 MAP2K7O14733 419 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 DAPK3O43293 454 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 LIASO43766 372 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 BAIAP3O94812 1187 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 RTN3O95197 1032 aaPredicted RBP6.69□□□□□ -1.34
TVP23B-209ENST00000581733 TIMP1P01033 207 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 APOC2P02655 101 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 ITGB1P05556 798 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 ATF2P15336 505 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 TCF4P15884 667 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 TNFRSF1AP19438 455 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 BDNFP23560 247 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 IL1R2P27930 398 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 ARL4AP40617 200 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 SLC11A1P49279 550 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 ALDH7A1P49419 539 aaKnown RBP6.69□□□□□ -1.34
TVP23B-209ENST00000581733 CARSP49589 748 aaKnown RBP6.69□□□□□ -1.34
TVP23B-209ENST00000581733 VCPP55072 806 aaKnown RBP6.69□□□□□ -1.34
TVP23B-209ENST00000581733 SUMO1P63165 101 aaKnown RBP6.69□□□□□ -1.34
TVP23B-209ENST00000581733 DEUP1Q05D60 604 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 CYP4F3Q08477 520 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 ADCY1Q08828 1119 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 SNX1Q13596 522 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 GPNMBQ14956 572 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 TAF5Q15542 800 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 TESK1Q15569 626 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 ARL13BQ3SXY8 428 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 ATP13A4Q4VNC1 1196 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 SLC39A12Q504Y0 691 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 DCAF6Q58WW2 860 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 SPDYCQ5MJ68 293 aa6.69□□□□□ -1.34
TVP23B-209ENST00000581733 SLC35F1Q5T1Q4 408 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms