RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	ARHGAP20	Q9P2F6	1191 aa		12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	CNOT8	Q9UFF9	292 aa	Known RBP	12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	DNAI1	Q9UI46	699 aa		12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	WASF3	Q9UPY6	502 aa		12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	LUC7L2	Q9Y383	392 aa	Known RBP	12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	PCDHB9	Q9Y5E1	797 aa		12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	12.83	□□□□□ -0.36	1e-7	■■□□□ 13.6
CDK5RAP3-222	ENST00000581708	SNX11	Q9Y5W9	270 aa		12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708		A0A1W2PR77	199 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	TMCO5B	A8MYB1	307 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	PRAMEF26	H0Y7S4	382 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	AP1G1	O43747	822 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	BNIP3L	O60238	219 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	SH3BP5	O60239	455 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	CBFA2T3	O75081	653 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	LEFTY1	O75610	366 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	POP4	O95707	220 aa	Known RBP	12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	CD160	O95971	181 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	PCK1	P35558	622 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ACVRL1	P37023	503 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	GRK6	P43250	576 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	HCAR3	P49019	387 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ARRB1	P49407	418 aa	Predicted RBP	12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	NUMB	P49757	651 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	CCNH	P51946	323 aa	Predicted RBP	12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	NEK3	P51956	506 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	TAS2R38	P59533	333 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	OGDH	Q02218	1023 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	RAD51	Q06609	339 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	TRIP6	Q15654	476 aa	Known RBP	12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ARSI	Q5FYB1	569 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	HGSNAT	Q68CP4	663 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	OR2AP1	Q8NGE2	309 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ARHGEF26	Q96DR7	871 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	SLC6A18	Q96N87	628 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	TNKS2	Q9H2K2	1166 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	EBF2	Q9HAK2	575 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	GDF3	Q9NR23	364 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	NDFIP2	Q9NV92	336 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	PCOLCE2	Q9UKZ9	415 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	AP4E1	Q9UPM8	1137 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	FNDC3A	Q9Y2H6	1198 aa	Known RBP	12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	MFHAS1	Q9Y4C4	1052 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	SLCO1B1	Q9Y6L6	691 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	WASF2	Q9Y6W5	498 aa		12.82	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	PLXNA2	O75051	1894 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708		A0A1B0GTQ1	180 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	TLR4	O00206	839 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	CBFA2T2	O43439	604 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	CREB3	O43889	395 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	PRPSAP2	O60256	369 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	HNRNPH3	P31942	346 aa	Known RBP	12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	RXRG	P48443	463 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	SUOX	P51687	545 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	METAP1	P53582	386 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	NXPH1	P58417	271 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	TPI1	P60174	286 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	PPP2CB	P62714	309 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	PPP2CA	P67775	309 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	SERINC3	Q13530	473 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	TRIM14	Q14142	442 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	PIGH	Q14442	188 aa	Predicted RBP	12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	STAT4	Q14765	748 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	GRM3	Q14832	879 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	BOLA3	Q53S33	107 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	TDRD12	Q587J7	1177 aa	Known RBP	12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	KIAA1161	Q6NSJ0	714 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	HORMAD1	Q86X24	394 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	PYROXD2	Q8N2H3	581 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	LZTR1	Q8N653	840 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	CHST14	Q8NCH0	376 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	BAHD1	Q8TBE0	780 aa	Predicted RBP	12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	SETD7	Q8WTS6	366 aa	Known RBP	12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ASB12	Q8WXK4	309 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ARRDC3	Q96B67	414 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ZNF653	Q96CK0	615 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ELF4	Q99607	663 aa	Predicted RBP	12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	NOL6	Q9H6R4	1146 aa	Known RBP	12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	IL21R	Q9HBE5	538 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	HECA	Q9UBI9	543 aa	Predicted RBP	12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	LCMT1	Q9UIC8	334 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	APOBEC2	Q9Y235	224 aa	Known RBP	12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	NEUROG3	Q9Y4Z2	214 aa		12.81	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	FAM221B	A6H8Z2	402 aa		12.8	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	RASA4B	C9J798	803 aa		12.8	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708		H0Y8X5	98 aa		12.8	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	RASA4	O43374	803 aa		12.8	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	TSPAN6	O43657	245 aa		12.8	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	BUB1	O43683	1085 aa		12.8	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	SKIL	P12757	684 aa		12.8	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ADRB3	P13945	408 aa		12.8	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	RPS21	P63220	83 aa	Known RBP	12.8	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	MYLK3	Q32MK0	819 aa		12.8	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ZNF805	Q5CZA5	627 aa		12.8	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	FBXL19	Q6PCT2	694 aa		12.8	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	DCP2	Q8IU60	420 aa	Known RBP	12.8	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	NIPA2	Q8N8Q9	360 aa		12.8	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	TMEM145	Q8NBT3	493 aa		12.8	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	GRIN3A	Q8TCU5	1115 aa		12.8	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	HCAR2	Q8TDS4	363 aa		12.8	□□□□□ -0.36

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