RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 CBFA2T2O43439 604 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 BUB1O43683 1085 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 SH3BP5O60239 455 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 PRPSAP2O60256 369 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 FAM228BP0C875 321 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 ZNF883P0CG24 379 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 CCNHP51946 323 aaPredicted RBP19.86■□□□□ 0.77
SREBF1-220ENST00000581707 C21orf59P57076 290 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 TAS2R38P59533 333 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 TPI1P60174 286 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 KCNT1Q5JUK3 1230 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 TRIM69Q86WT6 500 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 UMODL1-AS1Q8N2C9 162 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 SKA1Q96BD8 255 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 PPP1R16AQ96I34 528 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 SERAC1Q96JX3 654 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 PEBP4Q96S96 227 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 EIF3CQ99613 913 aaKnown RBP19.86■□□□□ 0.77
SREBF1-220ENST00000581707 NCAPGQ9BPX3 1015 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 SNRNP25Q9BV90 132 aaKnown RBP19.86■□□□□ 0.77
SREBF1-220ENST00000581707 HDAC8Q9BY41 377 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 TM6SF2Q9BZW4 377 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 PREBQ9HCU5 417 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 TM7SF3Q9NS93 570 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 ARHGAP20Q9P2F6 1191 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 HECAQ9UBI9 543 aaPredicted RBP19.86■□□□□ 0.77
SREBF1-220ENST00000581707 FNDC3AQ9Y2H6 1198 aaKnown RBP19.86■□□□□ 0.77
SREBF1-220ENST00000581707 TPRP12270 2363 aaKnown RBP19.85■□□□□ 0.77
SREBF1-220ENST00000581707 EEF2KO00418 725 aaKnown RBP19.85■□□□□ 0.77
SREBF1-220ENST00000581707 KCNK3O14649 394 aa19.85■□□□□ 0.77
SREBF1-220ENST00000581707 CD38P28907 300 aa19.85■□□□□ 0.77
SREBF1-220ENST00000581707 PMLP29590 882 aa19.85■□□□□ 0.77
SREBF1-220ENST00000581707 MAT2AP31153 395 aaKnown RBP19.85■□□□□ 0.77
SREBF1-220ENST00000581707 NUDT1P36639 197 aa19.85■□□□□ 0.77
SREBF1-220ENST00000581707 CTSKP43235 329 aa19.85■□□□□ 0.77
SREBF1-220ENST00000581707 ACAP1Q15027 740 aa19.85■□□□□ 0.77
SREBF1-220ENST00000581707 CA9Q16790 459 aa19.85■□□□□ 0.77
SREBF1-220ENST00000581707 PARP15Q460N3 678 aa19.85■□□□□ 0.77
SREBF1-220ENST00000581707 ERN2Q76MJ5 926 aaKnown RBP19.85■□□□□ 0.77
SREBF1-220ENST00000581707 PSTKQ8IV42 348 aaKnown RBP19.85■□□□□ 0.77
SREBF1-220ENST00000581707 HMCESQ96FZ2 354 aa19.85■□□□□ 0.77
SREBF1-220ENST00000581707 CAMK1GQ96NX5 476 aa19.85■□□□□ 0.77
SREBF1-220ENST00000581707 KLC2Q9H0B6 622 aa19.85■□□□□ 0.77
SREBF1-220ENST00000581707 THAP2Q9H0W7 228 aa19.85■□□□□ 0.77
SREBF1-220ENST00000581707 ZDHHC6Q9H6R6 413 aa19.85■□□□□ 0.77
SREBF1-220ENST00000581707 SPAARA0A1B0GVQ0 90 aa19.84■□□□□ 0.77
SREBF1-220ENST00000581707 WNT9AO14904 365 aa19.84■□□□□ 0.77
SREBF1-220ENST00000581707 LRCH4O75427 683 aa19.84■□□□□ 0.77
SREBF1-220ENST00000581707 WNT1P04628 370 aa19.84■□□□□ 0.77
SREBF1-220ENST00000581707 SNRPD1P62314 119 aaKnown RBP19.84■□□□□ 0.77
SREBF1-220ENST00000581707 SERINC3Q13530 473 aa19.84■□□□□ 0.77
SREBF1-220ENST00000581707 HNRNPDQ14103 355 aaKnown RBP19.84■□□□□ 0.77
SREBF1-220ENST00000581707 SPECC1LQ69YQ0 1117 aa19.84■□□□□ 0.77
SREBF1-220ENST00000581707 NEK5Q6P3R8 708 aa19.84■□□□□ 0.77
SREBF1-220ENST00000581707 ALKBH5Q6P6C2 394 aaKnown RBP19.84■□□□□ 0.77
SREBF1-220ENST00000581707 CYP4V2Q6ZWL3 525 aaPredicted RBP19.84■□□□□ 0.77
SREBF1-220ENST00000581707 NAXDQ8IW45 347 aa19.84■□□□□ 0.77
SREBF1-220ENST00000581707 RYBPQ8N488 228 aaPredicted RBP19.84■□□□□ 0.77
SREBF1-220ENST00000581707 KCTD15Q96SI1 283 aaPredicted RBP19.84■□□□□ 0.77
SREBF1-220ENST00000581707 DMTF1Q9Y222 760 aa19.84■□□□□ 0.77
SREBF1-220ENST00000581707 CHD8Q9HCK8 2581 aa19.84■□□□□ 0.77
SREBF1-220ENST00000581707 TP53BP1Q12888 1972 aaPredicted RBP19.83■□□□□ 0.77
SREBF1-220ENST00000581707 A0A1W2PR77 199 aa19.83■□□□□ 0.77
SREBF1-220ENST00000581707 DAPK3O43293 454 aa19.83■□□□□ 0.77
SREBF1-220ENST00000581707 RNGTTO60942 597 aaKnown RBP19.83■□□□□ 0.77
SREBF1-220ENST00000581707 TMCC1O94876 653 aa19.83■□□□□ 0.77
SREBF1-220ENST00000581707 GSRP00390 522 aa19.83■□□□□ 0.77
SREBF1-220ENST00000581707 ITGB7P26010 798 aa19.83■□□□□ 0.77
SREBF1-220ENST00000581707 HNRNPH3P31942 346 aaKnown RBP19.83■□□□□ 0.77
SREBF1-220ENST00000581707 PCK1P35558 622 aa19.83■□□□□ 0.77
SREBF1-220ENST00000581707 NDST2P52849 883 aa19.83■□□□□ 0.77
SREBF1-220ENST00000581707 SIM1P81133 766 aaPredicted RBP19.83■□□□□ 0.77
SREBF1-220ENST00000581707 ZNF423Q2M1K9 1284 aa19.83■□□□□ 0.77
SREBF1-220ENST00000581707 SETMARQ53H47 684 aaPredicted RBP19.83■□□□□ 0.77
SREBF1-220ENST00000581707 INO80DQ53TQ3 878 aaPredicted RBP19.83■□□□□ 0.77
SREBF1-220ENST00000581707 SLC45A4Q5BKX6 768 aa19.83■□□□□ 0.77
SREBF1-220ENST00000581707 PPP6R3Q5H9R7 873 aaPredicted RBP19.83■□□□□ 0.77
SREBF1-220ENST00000581707 CCDC122Q5T0U0 273 aa19.83■□□□□ 0.77
SREBF1-220ENST00000581707 NAPEPLDQ6IQ20 393 aa19.83■□□□□ 0.77
SREBF1-220ENST00000581707 RNF214Q8ND24 703 aa19.83■□□□□ 0.77
SREBF1-220ENST00000581707 OR2AP1Q8NGE2 309 aa19.83■□□□□ 0.77
SREBF1-220ENST00000581707 OR6K2Q8NGY2 324 aa19.83■□□□□ 0.77
SREBF1-220ENST00000581707 SETD7Q8WTS6 366 aaKnown RBP19.83■□□□□ 0.77
SREBF1-220ENST00000581707 CASKIN2Q8WXE0 1202 aa19.83■□□□□ 0.77
SREBF1-220ENST00000581707 LRRC19Q9H756 370 aa19.83■□□□□ 0.77
SREBF1-220ENST00000581707 ANGPTL2Q9UKU9 493 aa19.83■□□□□ 0.77
SREBF1-220ENST00000581707 PCDHB9Q9Y5E1 797 aa19.83■□□□□ 0.77
SREBF1-220ENST00000581707 PCDHGB2Q9Y5G2 931 aa19.83■□□□□ 0.77
SREBF1-220ENST00000581707 ACACBO00763 2458 aa19.83■□□□□ 0.76
SREBF1-220ENST00000581707 CEP295Q9C0D2 2601 aa19.82■□□□□ 0.76
SREBF1-220ENST00000581707 A0A1W2PQU0 124 aa19.82■□□□□ 0.76
SREBF1-220ENST00000581707 H0Y8X5 98 aa19.82■□□□□ 0.76
SREBF1-220ENST00000581707 KRIT1O00522 736 aa19.82■□□□□ 0.76
SREBF1-220ENST00000581707 DFNA5O60443 496 aa19.82■□□□□ 0.76
SREBF1-220ENST00000581707 PCDH8O95206 1070 aa19.82■□□□□ 0.76
SREBF1-220ENST00000581707 POP4O95707 220 aaKnown RBP19.82■□□□□ 0.76
SREBF1-220ENST00000581707 CYP1A2P05177 515 aa19.82■□□□□ 0.76
SREBF1-220ENST00000581707 GKP32189 559 aa19.82■□□□□ 0.76
SREBF1-220ENST00000581707 NEK3P51956 506 aa19.82■□□□□ 0.76
SREBF1-220ENST00000581707 FAM193AP78312 1265 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms