RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 FNDC3BQ53EP0 1204 aaKnown RBP10.09□□□□□ -0.79
GGA3-209ENST00000580646 HS1BP3Q53T59 392 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 ODF2Q5BJF6 829 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 ANKRD20A8PQ5CZ79 823 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 TRIM61Q5EBN2 209 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 PPM1JQ5JR12 505 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 SLC9A4Q6AI14 798 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 PEX26Q7Z412 305 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 SLC41A1Q8IVJ1 513 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 RCOR2Q8IZ40 523 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 UBL4BQ8N7F7 174 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 OR2T3Q8NH03 318 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 RAPGEF5Q92565 580 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 PRCCQ92733 491 aaPredicted RBP10.09□□□□□ -0.79
GGA3-209ENST00000580646 TOE1Q96GM8 510 aaKnown RBP10.09□□□□□ -0.79
GGA3-209ENST00000580646 ZNF419Q96HQ0 510 aaPredicted RBP10.09□□□□□ -0.79
GGA3-209ENST00000580646 HES6Q96HZ4 224 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 RNF157Q96PX1 679 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 NUSAP1Q9BXS6 441 aaKnown RBP10.09□□□□□ -0.79
GGA3-209ENST00000580646 CALN1Q9BXU9 219 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 GOLPH3Q9H4A6 298 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 ATP13A1Q9HD20 1204 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 LZTFL1Q9NQ48 299 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 WSB2Q9NYS7 404 aaPredicted RBP10.09□□□□□ -0.79
GGA3-209ENST00000580646 USP36Q9P275 1121 aaKnown RBP10.09□□□□□ -0.79
GGA3-209ENST00000580646 SUN2Q9UH99 717 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 VPS51Q9UID3 782 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 HPCAL4Q9UM19 191 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 GUCA1BQ9UMX6 200 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 CEP192Q8TEP8 1941 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 GON4LQ3T8J9 2241 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 ATXN2Q99700 1313 aaKnown RBP10.08□□□□□ -0.8
GGA3-209ENST00000580646 USP24Q9UPU5 2620 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 TARSL2A2RTX5 802 aaKnown RBP10.08□□□□□ -0.8
GGA3-209ENST00000580646 RASA4BC9J798 803 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 CDX4O14627 284 aaPredicted RBP10.08□□□□□ -0.8
GGA3-209ENST00000580646 RASA4O43374 803 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 KRT1P04264 644 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 ACADMP11310 421 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 AMPD1P23109 780 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 OXTRP30559 389 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 HOXD12P35452 270 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 GJC1P36383 396 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 CDKN2BP42772 138 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 TPMTP51580 245 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 RWDD2BP57060 319 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 ARF5P84085 180 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 SERINC3Q13530 473 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 TFDP2Q14188 446 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 DUOXA1Q1HG43 343 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 HNRNPA1L2Q32P51 320 aaKnown RBP10.08□□□□□ -0.8
GGA3-209ENST00000580646 INO80DQ53TQ3 878 aaPredicted RBP10.08□□□□□ -0.8
GGA3-209ENST00000580646 TFDP3Q5H9I0 405 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 ZFYVE27Q5T4F4 411 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 TMCO4Q5TGY1 634 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 PEAR1Q5VY43 1037 aaPredicted RBP10.08□□□□□ -0.8
GGA3-209ENST00000580646 NCBP2-AS2Q69YL0 99 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 SLC23A3Q6PIS1 610 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 ARHGAP12Q8IWW6 846 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 REXO1L1PQ8IX06 675 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 SH2D3CQ8N5H7 860 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 NPWQ8N729 165 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 ZNF366Q8N895 744 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 OR7D4Q8NG98 312 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 PCDH19Q8TAB3 1148 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 CEP76Q8TAP6 659 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 KRT35Q92764 455 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 FATE1Q969F0 183 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 ISG20Q96AZ6 181 aaKnown RBP10.08□□□□□ -0.8
GGA3-209ENST00000580646 HSPA12BQ96MM6 686 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 GPR174Q9BXC1 333 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 CEP44Q9C0F1 390 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 TMEM9BQ9NQ34 198 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 PRSS16Q9NQE7 514 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 KCND1Q9NSA2 647 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 SLC6A14Q9UN76 642 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 HYOU1Q9Y4L1 999 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 THADAQ6YHU6 1953 aa10.08□□□□□ -0.8
GGA3-209ENST00000580646 ATRXP46100 2492 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 EDDM13A0A1B0GTR0 161 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 ALOX15BO15296 676 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 IGLV3-19P01714 112 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 SERPINF2P08697 491 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 SRCP12931 536 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 HOXB3P14651 431 aaPredicted RBP10.07□□□□□ -0.8
GGA3-209ENST00000580646 MSNP26038 577 aaKnown RBP10.07□□□□□ -0.8
GGA3-209ENST00000580646 ACVRL1P37023 503 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 CETN2P41208 172 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 CTSOP43234 321 aaPredicted RBP10.07□□□□□ -0.8
GGA3-209ENST00000580646 NR2C2P49116 596 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 SERPINH1P50454 418 aaKnown RBP10.07□□□□□ -0.8
GGA3-209ENST00000580646 MMRN1Q13201 1228 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 COL9A2Q14055 689 aaPredicted RBP10.07□□□□□ -0.8
GGA3-209ENST00000580646 RFTN1Q14699 578 aaPredicted RBP10.07□□□□□ -0.8
GGA3-209ENST00000580646 WDR45BQ5MNZ6 344 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 SYCP2LQ5T4T6 812 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 MEI1Q5TIA1 1274 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 MFSD7Q6UXD7 560 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 SPOCD1Q6ZMY3 1216 aa10.07□□□□□ -0.8
GGA3-209ENST00000580646 BZW1Q7L1Q6 419 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms