RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 ISG20Q96AZ6 181 aaKnown RBP16.19■□□□□ 0.18
CRLF3-203ENST00000578692 TBC1D31Q96DN5 1066 aa16.19■□□□□ 0.18
CRLF3-203ENST00000578692 NAT10Q9H0A0 1025 aaKnown RBP16.19■□□□□ 0.18
CRLF3-203ENST00000578692 MAGEH1Q9H213 219 aa16.19■□□□□ 0.18
CRLF3-203ENST00000578692 TMEM63CQ9P1W3 806 aa16.19■□□□□ 0.18
CRLF3-203ENST00000578692 HPCAL4Q9UM19 191 aa16.19■□□□□ 0.18
CRLF3-203ENST00000578692 CA5BQ9Y2D0 317 aa16.19■□□□□ 0.18
CRLF3-203ENST00000578692 SPEGQ15772 3267 aa16.19■□□□□ 0.18
CRLF3-203ENST00000578692 USP24Q9UPU5 2620 aa16.18■□□□□ 0.18
CRLF3-203ENST00000578692 TCRBV5S1A1TA0A578 114 aa16.18■□□□□ 0.18
CRLF3-203ENST00000578692 ANKRD62A6NC57 917 aa16.18■□□□□ 0.18
CRLF3-203ENST00000578692 ENC1O14682 589 aa16.18■□□□□ 0.18
CRLF3-203ENST00000578692 TEX33O43247 280 aa16.18■□□□□ 0.18
CRLF3-203ENST00000578692 L1CAMP32004 1257 aa16.18■□□□□ 0.18
CRLF3-203ENST00000578692 CCNHP51946 323 aaPredicted RBP16.18■□□□□ 0.18
CRLF3-203ENST00000578692 NEK3P51956 506 aa16.18■□□□□ 0.18
CRLF3-203ENST00000578692 GEMIN4P57678 1058 aaKnown RBP16.18■□□□□ 0.18
CRLF3-203ENST00000578692 POLD3Q15054 466 aaPredicted RBP16.18■□□□□ 0.18
CRLF3-203ENST00000578692 ZNF284Q2VY69 593 aa16.18■□□□□ 0.18
CRLF3-203ENST00000578692 ACAD10Q6JQN1 1059 aa16.18■□□□□ 0.18
CRLF3-203ENST00000578692 DNAJC24Q6P3W2 148 aa16.18■□□□□ 0.18
CRLF3-203ENST00000578692 SCYL2Q6P3W7 929 aa16.18■□□□□ 0.18
CRLF3-203ENST00000578692 CNDP2Q96KP4 475 aaKnown RBP16.18■□□□□ 0.18
CRLF3-203ENST00000578692 MYOCQ99972 504 aa16.18■□□□□ 0.18
CRLF3-203ENST00000578692 HECAQ9UBI9 543 aaPredicted RBP16.18■□□□□ 0.18
CRLF3-203ENST00000578692 ZFR2Q9UPR6 939 aaKnown RBP16.18■□□□□ 0.18
CRLF3-203ENST00000578692 ASPMQ8IZT6 3477 aa16.18■□□□□ 0.18
CRLF3-203ENST00000578692 TAF4O00268 1085 aa16.17■□□□□ 0.18
CRLF3-203ENST00000578692 CCP110O43303 1012 aa16.17■□□□□ 0.18
CRLF3-203ENST00000578692 RAMP2O60895 175 aa16.17■□□□□ 0.18
CRLF3-203ENST00000578692 THEGLP0DJG4 465 aa16.17■□□□□ 0.18
CRLF3-203ENST00000578692 ADRB3P13945 408 aa16.17■□□□□ 0.18
CRLF3-203ENST00000578692 PRLRP16471 622 aa16.17■□□□□ 0.18
CRLF3-203ENST00000578692 TNFAIP3P21580 790 aa16.17■□□□□ 0.18
CRLF3-203ENST00000578692 HNRNPA2B1P22626 353 aaKnown RBP16.17■□□□□ 0.18
CRLF3-203ENST00000578692 ITGB7P26010 798 aa16.17■□□□□ 0.18
CRLF3-203ENST00000578692 ZNF143P52747 638 aaPredicted RBP16.17■□□□□ 0.18
CRLF3-203ENST00000578692 RPL7AP62424 266 aaKnown RBP16.17■□□□□ 0.18
CRLF3-203ENST00000578692 ANO6Q4KMQ2 910 aa16.17■□□□□ 0.18
CRLF3-203ENST00000578692 FBXL19Q6PCT2 694 aa16.17■□□□□ 0.18
CRLF3-203ENST00000578692 IRF2BP2Q7Z5L9 587 aa16.17■□□□□ 0.18
CRLF3-203ENST00000578692 MCOLN2Q8IZK6 566 aa16.17■□□□□ 0.18
CRLF3-203ENST00000578692 PYROXD2Q8N2H3 581 aa16.17■□□□□ 0.18
CRLF3-203ENST00000578692 TMEM145Q8NBT3 493 aa16.17■□□□□ 0.18
CRLF3-203ENST00000578692 FEM1CQ96JP0 617 aa16.17■□□□□ 0.18
CRLF3-203ENST00000578692 MCEEQ96PE7 176 aa16.17■□□□□ 0.18
CRLF3-203ENST00000578692 TM6SF2Q9BZW4 377 aa16.17■□□□□ 0.18
CRLF3-203ENST00000578692 NEU3Q9UQ49 428 aa16.17■□□□□ 0.18
CRLF3-203ENST00000578692 COL5A1P20908 1838 aaPredicted RBP16.17■□□□□ 0.18
CRLF3-203ENST00000578692 AKAP13Q12802 2813 aa16.17■□□□□ 0.18
CRLF3-203ENST00000578692 CHD5Q8TDI0 1954 aa16.16■□□□□ 0.18
CRLF3-203ENST00000578692 SMTNL1A8MU46 457 aa16.16■□□□□ 0.18
CRLF3-203ENST00000578692 KDELR3O43731 214 aa16.16■□□□□ 0.18
CRLF3-203ENST00000578692 EPHB2P29323 1055 aa16.16■□□□□ 0.18
CRLF3-203ENST00000578692 AKT2P31751 481 aa16.16■□□□□ 0.18
CRLF3-203ENST00000578692 SMAD1Q15797 465 aaKnown RBP16.16■□□□□ 0.18
CRLF3-203ENST00000578692 EFHC2Q5JST6 749 aa16.16■□□□□ 0.18
CRLF3-203ENST00000578692 PPP1R15BQ5SWA1 713 aa16.16■□□□□ 0.18
CRLF3-203ENST00000578692 SFMBT2Q5VUG0 894 aa16.16■□□□□ 0.18
CRLF3-203ENST00000578692 DHRS13Q6UX07 377 aa16.16■□□□□ 0.18
CRLF3-203ENST00000578692 KANSL1Q7Z3B3 1105 aa16.16■□□□□ 0.18
CRLF3-203ENST00000578692 PROSER1Q86XN7 944 aa16.16■□□□□ 0.18
CRLF3-203ENST00000578692 RYBPQ8N488 228 aaPredicted RBP16.16■□□□□ 0.18
CRLF3-203ENST00000578692 LRIG1Q96JA1 1093 aa16.16■□□□□ 0.18
CRLF3-203ENST00000578692 BPIFA3Q9BQP9 254 aa16.16■□□□□ 0.18
CRLF3-203ENST00000578692 CNPY3Q9BT09 278 aa16.16■□□□□ 0.18
CRLF3-203ENST00000578692 CCDC86Q9H6F5 360 aaKnown RBP16.16■□□□□ 0.18
CRLF3-203ENST00000578692 ZDHHC6Q9H6R6 413 aa16.16■□□□□ 0.18
CRLF3-203ENST00000578692 FZD3Q9NPG1 666 aa16.16■□□□□ 0.18
CRLF3-203ENST00000578692 RTN4Q9NQC3 1192 aaKnown RBP16.16■□□□□ 0.18
CRLF3-203ENST00000578692 MYO6Q9UM54 1294 aa16.16■□□□□ 0.18
CRLF3-203ENST00000578692 PCDHGA1Q9Y5H4 931 aa16.16■□□□□ 0.18
CRLF3-203ENST00000578692 FADS3Q9Y5Q0 445 aa16.16■□□□□ 0.18
CRLF3-203ENST00000578692 CEP295Q9C0D2 2601 aa16.16■□□□□ 0.18
CRLF3-203ENST00000578692 CREB3O43889 395 aa16.15■□□□□ 0.18
CRLF3-203ENST00000578692 C1SP09871 688 aa16.15■□□□□ 0.18
CRLF3-203ENST00000578692 GKP32189 559 aa16.15■□□□□ 0.18
CRLF3-203ENST00000578692 AIF1P55008 147 aa16.15■□□□□ 0.18
CRLF3-203ENST00000578692 SNRPD1P62314 119 aaKnown RBP16.15■□□□□ 0.18
CRLF3-203ENST00000578692 RPS21P63220 83 aaKnown RBP16.15■□□□□ 0.18
CRLF3-203ENST00000578692 DNAJC3Q13217 504 aa16.15■□□□□ 0.18
CRLF3-203ENST00000578692 TMEM259Q4ZIN3 620 aa16.15■□□□□ 0.18
CRLF3-203ENST00000578692 SEL1L3Q68CR1 1132 aa16.15■□□□□ 0.18
CRLF3-203ENST00000578692 DCUN1D2Q6PH85 259 aa16.15■□□□□ 0.18
CRLF3-203ENST00000578692 LEKR1Q6ZMV7 388 aa16.15■□□□□ 0.18
CRLF3-203ENST00000578692 ZNF354CQ86Y25 554 aa16.15■□□□□ 0.18
CRLF3-203ENST00000578692 MARCH9Q86YJ5 346 aa16.15■□□□□ 0.18
CRLF3-203ENST00000578692 OR2AP1Q8NGE2 309 aa16.15■□□□□ 0.18
CRLF3-203ENST00000578692 VCPIP1Q96JH7 1222 aa16.15■□□□□ 0.18
CRLF3-203ENST00000578692 SLC17A9Q9BYT1 436 aa16.15■□□□□ 0.18
CRLF3-203ENST00000578692 FZD10Q9ULW2 581 aa16.15■□□□□ 0.18
CRLF3-203ENST00000578692 HS3ST3A1Q9Y663 406 aa16.15■□□□□ 0.18
CRLF3-203ENST00000578692 FAM149AA5PLN7 773 aa16.14■□□□□ 0.17
CRLF3-203ENST00000578692 ZSCAN5CA6NGD5 496 aaPredicted RBP16.14■□□□□ 0.17
CRLF3-203ENST00000578692 C16orf96A6NNT2 1141 aa16.14■□□□□ 0.17
CRLF3-203ENST00000578692 BUB1O43683 1085 aa16.14■□□□□ 0.17
CRLF3-203ENST00000578692 AP1G1O43747 822 aa16.14■□□□□ 0.17
CRLF3-203ENST00000578692 SDC3O75056 442 aa16.14■□□□□ 0.17
CRLF3-203ENST00000578692 POP4O95707 220 aaKnown RBP16.14■□□□□ 0.17
CRLF3-203ENST00000578692 PAK4O96013 591 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms