RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 COPAP53621 1224 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 MARC1Q5VT66 337 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 KIAA1211LQ6NV74 962 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 SLC36A4Q6YBV0 504 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 ASCL5Q7RTU5 278 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 PGBD3Q8N328 593 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 OR2AP1Q8NGE2 309 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 OR2A12Q8NGT7 310 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 HMGB4Q8WW32 186 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 MAIP1Q8WWC4 291 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 MAML1Q92585 1016 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 ALG3Q92685 438 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 SPACA7Q96KW9 195 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 GDAP1L1Q96MZ0 367 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 FAM129BQ96TA1 746 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 HEPHQ9BQS7 1158 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 OSBPL1AQ9BXW6 950 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 CPEB1Q9BZB8 566 aaKnown RBP12.59□□□□□ -0.39
RARA-208ENST00000577646 PCED1AQ9H1Q7 454 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 PPM1HQ9ULR3 514 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 NCKAP1Q9Y2A7 1128 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 CACNA1IQ9P0X4 2223 aa12.58□□□□□ -0.39
RARA-208ENST00000577646 A0A1W2PQ67 120 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 J3KR12 359 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 SLC7A4O43246 635 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 SMAD6O43541 496 aaKnown RBP12.58□□□□□ -0.4
RARA-208ENST00000577646 MFSD11O43934 449 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 ZNF821O75541 412 aaPredicted RBP12.58□□□□□ -0.4
RARA-208ENST00000577646 TMCC1O94876 653 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 IGSF6O95976 241 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 PYGMP11217 842 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 NDUFV2P19404 249 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 CHRNA3P32297 505 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 MARCKSL1P49006 195 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 SUOXP51687 545 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 RPS14P62263 151 aaKnown RBP12.58□□□□□ -0.4
RARA-208ENST00000577646 GBE1Q04446 702 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 PPIDQ08752 370 aaKnown RBP12.58□□□□□ -0.4
RARA-208ENST00000577646 CKAP5Q14008 2032 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 LBRQ14739 615 aaKnown RBP12.58□□□□□ -0.4
RARA-208ENST00000577646 MYLK3Q32MK0 819 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 SEL1L2Q5TEA6 688 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 CCDC181Q5TID7 509 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 ANO7Q6IWH7 933 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 LINGO4Q6UY18 593 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 TEX26Q8N6G2 289 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 MDGA1Q8NFP4 955 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 GAB3Q8WWW8 586 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 HAUS1Q96CS2 278 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 PPP1R16AQ96I34 528 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 OLFM3Q96PB7 478 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 HHIPQ96QV1 700 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 TUBGCP5Q96RT8 1024 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 VAT1Q99536 393 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 MKRN2Q9H000 416 aaKnown RBP12.58□□□□□ -0.4
RARA-208ENST00000577646 KDM4CQ9H3R0 1056 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 ZDHHC4Q9NPG8 344 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 C2orf42Q9NWW7 574 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 USP36Q9P275 1121 aaKnown RBP12.58□□□□□ -0.4
RARA-208ENST00000577646 FZD4Q9ULV1 537 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 HEY1Q9Y5J3 304 aa12.58□□□□□ -0.4
RARA-208ENST00000577646 ZNF292O60281 2723 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 DCHS1Q96JQ0 3298 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.57□□□□□ -0.4
RARA-208ENST00000577646 ANTXRLA6NF34 631 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 K7ERQ8 282 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 CES2O00748 559 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 PEX11BO96011 259 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 KRT10P13645 584 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 SLC8A1P32418 973 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 P2RY2P41231 377 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 DPP6P42658 865 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 FNTBP49356 437 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 RHOAP61586 193 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 AP1S1P61966 158 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 SLC10A2Q12908 348 aaPredicted RBP12.57□□□□□ -0.4
RARA-208ENST00000577646 CYTH1Q15438 398 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 CST6Q15828 149 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 Q6ZVU0 165 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 ZSCAN30Q86W11 494 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 CCDC13Q8IYE1 715 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 STK40Q8N2I9 435 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 CCNYQ8ND76 341 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 ZC3H10Q96K80 434 aaKnown RBP12.57□□□□□ -0.4
RARA-208ENST00000577646 PBKQ96KB5 322 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 ZNF641Q96N77 438 aaPredicted RBP12.57□□□□□ -0.4
RARA-208ENST00000577646 HINFPQ9BQA5 517 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 CINPQ9BW66 212 aaPredicted RBP12.57□□□□□ -0.4
RARA-208ENST00000577646 TLR10Q9BXR5 811 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 SGK2Q9HBY8 427 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 HOMER3Q9NSC5 361 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 HECAQ9UBI9 543 aaPredicted RBP12.57□□□□□ -0.4
RARA-208ENST00000577646 IL36AQ9UHA7 158 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 ZKSCAN5Q9Y2L8 839 aa12.57□□□□□ -0.4
RARA-208ENST00000577646 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.57□□□□□ -0.4
RARA-208ENST00000577646 FRYLO94915 3013 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 NUP205Q92621 2012 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 RPP40O75818 363 aaKnown RBP12.56□□□□□ -0.4
RARA-208ENST00000577646 NEBLO76041 1014 aa12.56□□□□□ -0.4
RARA-208ENST00000577646 IL1BP01584 269 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms