RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 TMEM63AO94886 807 aa24.43■■□□□ 1.5
ATPAF1-213ENST00000574428 POLR2EP19388 210 aaKnown RBP24.43■■□□□ 1.5
ATPAF1-213ENST00000574428 SERPINH1P50454 418 aaKnown RBP24.43■■□□□ 1.5
ATPAF1-213ENST00000574428 KCNJ11Q14654 390 aa24.43■■□□□ 1.5
ATPAF1-213ENST00000574428 PCGF5Q86SE9 256 aa24.43■■□□□ 1.5
ATPAF1-213ENST00000574428 BBS5Q8N3I7 341 aa24.43■■□□□ 1.5
ATPAF1-213ENST00000574428 NAT8LQ8N9F0 302 aa24.43■■□□□ 1.5
ATPAF1-213ENST00000574428 SPATA22Q8NHS9 363 aa24.43■■□□□ 1.5
ATPAF1-213ENST00000574428 SORCS1Q8WY21 1168 aa24.43■■□□□ 1.5
ATPAF1-213ENST00000574428 PRCCQ92733 491 aaPredicted RBP24.43■■□□□ 1.5
ATPAF1-213ENST00000574428 EXOC2Q96KP1 924 aa24.43■■□□□ 1.5
ATPAF1-213ENST00000574428 PSKH2Q96QS6 385 aa24.43■■□□□ 1.5
ATPAF1-213ENST00000574428 CIPCQ9C0C6 399 aa24.43■■□□□ 1.5
ATPAF1-213ENST00000574428 ARFGAP3Q9NP61 516 aa24.43■■□□□ 1.5
ATPAF1-213ENST00000574428 UBP1Q9NZI7 540 aa24.43■■□□□ 1.5
ATPAF1-213ENST00000574428 MYO18AQ92614 2054 aaKnown RBP24.43■■□□□ 1.5
ATPAF1-213ENST00000574428 GOLGA8MH3BSY2 632 aa24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 GEMIN4P57678 1058 aaKnown RBP24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 ECT2LQ008S8 904 aa24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 DSC2Q02487 901 aa24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 MORF4L2Q15014 288 aa24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 INO80DQ53TQ3 878 aaPredicted RBP24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 SFTPA1Q8IWL2 248 aa24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 PHTF2Q8N3S3 785 aa24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 ATP11CQ8NB49 1132 aa24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 HNRNPLLQ8WVV9 542 aaKnown RBP24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 NXPE3Q969Y0 559 aa24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 OXNAD1Q96HP4 312 aaPredicted RBP24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 MLPHQ9BV36 600 aaPredicted RBP24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 MIA3Q5JRA6 1907 aa24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 RGRP47804 291 aa24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 NIPAL4Q0D2K0 466 aa24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 RNF135Q8IUD6 432 aa24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 PDCD7Q8N8D1 485 aaKnown RBP24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 WFIKKN2Q8TEU8 576 aa24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 CYB5D2Q8WUJ1 264 aa24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 EXOC4Q96A65 974 aa24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 TTC17Q96AE7 1141 aa24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 PWWP2AQ96N64 755 aa24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 FCRL5Q96RD9 977 aa24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 MGME1Q9BQP7 344 aa24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 POLR1EQ9GZS1 481 aaKnown RBP24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 LHX3Q9UBR4 397 aa24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 SLC25A13Q9UJS0 675 aa24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 SHOC2Q9UQ13 582 aa24.42■■□□□ 1.5
ATPAF1-213ENST00000574428 PRRT4C9JH25 899 aa24.41■■□□□ 1.5
ATPAF1-213ENST00000574428 ERLIN1O75477 346 aa24.41■■□□□ 1.5
ATPAF1-213ENST00000574428 MT-CYBP00156 380 aaPredicted RBP24.41■■□□□ 1.5
ATPAF1-213ENST00000574428 LMAN1P49257 510 aa24.41■■□□□ 1.5
ATPAF1-213ENST00000574428 SULT2A1Q06520 285 aa24.41■■□□□ 1.5
ATPAF1-213ENST00000574428 RBM15Q96T37 977 aaKnown RBP eCLIP24.41■■□□□ 1.5
ATPAF1-213ENST00000574428 SEMA3CQ99985 751 aa24.41■■□□□ 1.5
ATPAF1-213ENST00000574428 SLC25A51Q9H1U9 297 aa24.41■■□□□ 1.5
ATPAF1-213ENST00000574428 HS3ST2Q9Y278 367 aa24.41■■□□□ 1.5
ATPAF1-213ENST00000574428 RRP9O43818 475 aaKnown RBP24.4■■□□□ 1.5
ATPAF1-213ENST00000574428 FAM153BP0C7A2 387 aa24.4■■□□□ 1.5
ATPAF1-213ENST00000574428 SRCP12931 536 aa24.4■■□□□ 1.5
ATPAF1-213ENST00000574428 MAGEA6P43360 314 aa24.4■■□□□ 1.5
ATPAF1-213ENST00000574428 RHOAP61586 193 aa24.4■■□□□ 1.5
ATPAF1-213ENST00000574428 CAV1Q03135 178 aa24.4■■□□□ 1.5
ATPAF1-213ENST00000574428 PRPSAP1Q14558 356 aa24.4■■□□□ 1.5
ATPAF1-213ENST00000574428 FAM153CQ494X1 144 aa24.4■■□□□ 1.5
ATPAF1-213ENST00000574428 HOOK3Q86VS8 718 aa24.4■■□□□ 1.5
ATPAF1-213ENST00000574428 EIF1ADQ8N9N8 165 aaKnown RBP24.4■■□□□ 1.5
ATPAF1-213ENST00000574428 TERB1Q8NA31 727 aa24.4■■□□□ 1.5
ATPAF1-213ENST00000574428 IMP4Q96G21 291 aaKnown RBP24.4■■□□□ 1.5
ATPAF1-213ENST00000574428 FMO2Q99518 471 aa24.4■■□□□ 1.5
ATPAF1-213ENST00000574428 FAM153AQ9UHL3 310 aa24.4■■□□□ 1.5
ATPAF1-213ENST00000574428 ERVW-1Q9UQF0 538 aa24.4■■□□□ 1.5
ATPAF1-213ENST00000574428 COL4A2P08572 1712 aa24.4■■□□□ 1.5
ATPAF1-213ENST00000574428 CD86P42081 329 aa24.39■■□□□ 1.5
ATPAF1-213ENST00000574428 SLC20A2Q08357 652 aa24.39■■□□□ 1.5
ATPAF1-213ENST00000574428 SPARCL1Q14515 664 aa24.39■■□□□ 1.5
ATPAF1-213ENST00000574428 ARRDC2Q8TBH0 407 aa24.39■■□□□ 1.5
ATPAF1-213ENST00000574428 HAUS2Q9NVX0 235 aa24.39■■□□□ 1.5
ATPAF1-213ENST00000574428 SLCO3A1Q9UIG8 710 aa24.39■■□□□ 1.5
ATPAF1-213ENST00000574428 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.39■■□□□ 1.49
ATPAF1-213ENST00000574428 LOC730098B7Z3J9 87 aa24.39■■□□□ 1.49
ATPAF1-213ENST00000574428 NDC80O14777 642 aa24.39■■□□□ 1.49
ATPAF1-213ENST00000574428 NARSO43776 548 aaKnown RBP24.39■■□□□ 1.49
ATPAF1-213ENST00000574428 MMP2P08253 660 aa24.39■■□□□ 1.49
ATPAF1-213ENST00000574428 TPSB2P20231 275 aa24.39■■□□□ 1.49
ATPAF1-213ENST00000574428 EIF2DP41214 584 aaKnown RBP24.39■■□□□ 1.49
ATPAF1-213ENST00000574428 OLIG2Q13516 323 aa24.39■■□□□ 1.49
ATPAF1-213ENST00000574428 IHHQ14623 411 aa24.39■■□□□ 1.49
ATPAF1-213ENST00000574428 TPSAB1Q15661 275 aa24.39■■□□□ 1.49
ATPAF1-213ENST00000574428 BEND6Q5SZJ8 279 aaPredicted RBP24.39■■□□□ 1.49
ATPAF1-213ENST00000574428 PRPF39Q86UA1 669 aaKnown RBP24.39■■□□□ 1.49
ATPAF1-213ENST00000574428 SH2D3CQ8N5H7 860 aa24.39■■□□□ 1.49
ATPAF1-213ENST00000574428 FAM129AQ9BZQ8 928 aa24.39■■□□□ 1.49
ATPAF1-213ENST00000574428 TM6SF2Q9BZW4 377 aa24.39■■□□□ 1.49
ATPAF1-213ENST00000574428 TNKS2Q9H2K2 1166 aa24.39■■□□□ 1.49
ATPAF1-213ENST00000574428 ELOVL2Q9NXB9 296 aa24.39■■□□□ 1.49
ATPAF1-213ENST00000574428 CXorf51AA0A1B0GTR3 108 aa24.38■■□□□ 1.49
ATPAF1-213ENST00000574428 HSPA9P38646 679 aaKnown RBP24.38■■□□□ 1.49
ATPAF1-213ENST00000574428 SCNN1BP51168 640 aa24.38■■□□□ 1.49
ATPAF1-213ENST00000574428 MTM1Q13496 603 aa24.38■■□□□ 1.49
ATPAF1-213ENST00000574428 ATXN7L2Q5T6C5 722 aaPredicted RBP24.38■■□□□ 1.49
ATPAF1-213ENST00000574428 ALG1LQ6GMV1 187 aa24.38■■□□□ 1.49
ATPAF1-213ENST00000574428 MRGPRX3Q96LB0 322 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms