RNA–Protein interactions for RNA: ENST00000574060.1

RNF213-218, Transcript of ring finger protein 213, human

TSL 2

Gene RNF213, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF213-218	ENST00000574060	NETO1	Q8TDF5	533 aa		13.62	□□□□□ -0.23
RNF213-218	ENST00000574060	PPP1R16A	Q96I34	528 aa		13.62	□□□□□ -0.23
RNF213-218	ENST00000574060	HEPH	Q9BQS7	1158 aa		13.62	□□□□□ -0.23
RNF213-218	ENST00000574060	TM6SF2	Q9BZW4	377 aa		13.62	□□□□□ -0.23
RNF213-218	ENST00000574060	SLC39A8	Q9C0K1	460 aa		13.62	□□□□□ -0.23
RNF213-218	ENST00000574060	KDM4C	Q9H3R0	1056 aa		13.62	□□□□□ -0.23
RNF213-218	ENST00000574060	PDF	Q9HBH1	243 aa		13.62	□□□□□ -0.23
RNF213-218	ENST00000574060	DYRK4	Q9NR20	520 aa		13.62	□□□□□ -0.23
RNF213-218	ENST00000574060	UBA2	Q9UBT2	640 aa	Predicted RBP	13.62	□□□□□ -0.23
RNF213-218	ENST00000574060	TPX2	Q9ULW0	747 aa	Known RBP	13.62	□□□□□ -0.23
RNF213-218	ENST00000574060	WASF2	Q9Y6W5	498 aa		13.62	□□□□□ -0.23
RNF213-218	ENST00000574060	NUMA1	Q14980	2115 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	LNP1	A1A4G5	178 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	SOWAHD	A6NJG2	315 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	TMEM110-MUSTN1	A8MSY1	372 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	KPNA3	O00505	521 aa	Predicted RBP	13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	PLRG1	O43660	514 aa	Known RBP	13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	LEFTY1	O75610	366 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	NDUFA10	O95299	355 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	IPO7	O95373	1038 aa	Known RBP	13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	CFI	P05156	583 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	SERPINF2	P08697	491 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	AMPD1	P23109	780 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	MAOB	P27338	520 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	SERPINB6	P35237	376 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	GJC1	P36383	396 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	SLC1A1	P43005	524 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	PAPOLA	P51003	745 aa	Known RBP	13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	ARSE	P51690	589 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	LIMK1	P53667	647 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	HADHB	P55084	474 aa	Known RBP	13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	TAS2R40	P59535	323 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	CNTN1	Q12860	1018 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	PDK2	Q15119	407 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	ARSI	Q5FYB1	569 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	AGBL4	Q5VU57	503 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	NCEH1	Q6PIU2	408 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	LEKR1	Q6ZMV7	388 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	CPNE8	Q86YQ8	564 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	MAP7D3	Q8IWC1	876 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	OR14C36	Q8NHC7	312 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	SNX19	Q92543	992 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	BIRC7	Q96CA5	298 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	LRIG1	Q96JA1	1093 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	GDAP1L1	Q96MZ0	367 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	ZNF670	Q9BS34	389 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	EDEM2	Q9BV94	578 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	SP110	Q9HB58	689 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	HECA	Q9UBI9	543 aa	Predicted RBP	13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	EIF2B4	Q9UI10	523 aa	Known RBP	13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	CDV3	Q9UKY7	258 aa	Known RBP	13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	SLC6A14	Q9UN76	642 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	PCDHA13	Q9Y5I0	950 aa		13.61	□□□□□ -0.23
RNF213-218	ENST00000574060	WDR87	Q6ZQQ6	2873 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060		A0A0A6YYK5	440 aa	Predicted RBP	13.6	□□□□□ -0.23
RNF213-218	ENST00000574060		A0A1B0GTW7	788 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	FAM47DP	A6NHR8	397 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	GOLGA6L6	A8MZA4	724 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	C10orf142	B7Z368	130 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060		J3KR12	359 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	DFFA	O00273	331 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	PLK4	O00444	970 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	GDF9	O60383	454 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	FSBP	O95073	299 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	POP4	O95707	220 aa	Known RBP	13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	IGSF6	O95976	241 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	IL4R	P24394	825 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	ITGB7	P26010	798 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	CCR5	P51681	352 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	RHOA	P61586	193 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	IRX4	P78413	519 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	IL10RB	Q08334	325 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	DPYSL3	Q14195	570 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	RFTN1	Q14699	578 aa	Predicted RBP	13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	POM121L1P	Q3SYA9	428 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	RYBP	Q8N488	228 aa	Predicted RBP	13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	KCTD6	Q8NC69	237 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	ARRDC3	Q96B67	414 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	CALN1	Q9BXU9	219 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	OSBPL1A	Q9BXW6	950 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	HDAC8	Q9BY41	377 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	MIR1-1HG	Q9H1L0	117 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	ZDHHC6	Q9H6R6	413 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	CAPN10	Q9HC96	672 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	RXFP3	Q9NSD7	469 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	ETNK2	Q9NVF9	386 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	PCDH15	Q96QU1	1955 aa		13.6	□□□□□ -0.23
RNF213-218	ENST00000574060	KRIT1	O00522	736 aa		13.59	□□□□□ -0.23
RNF213-218	ENST00000574060	BCAT2	O15382	392 aa	Predicted RBP	13.59	□□□□□ -0.23
RNF213-218	ENST00000574060	IGHV4-34	P06331	123 aa		13.59	□□□□□ -0.23
RNF213-218	ENST00000574060	CD48	P09326	243 aa		13.59	□□□□□ -0.23
RNF213-218	ENST00000574060	CD27	P26842	260 aa		13.59	□□□□□ -0.23
RNF213-218	ENST00000574060	ID4	P47928	161 aa		13.59	□□□□□ -0.23
RNF213-218	ENST00000574060	NEK3	P51956	506 aa		13.59	□□□□□ -0.23
RNF213-218	ENST00000574060	RAD51	Q06609	339 aa		13.59	□□□□□ -0.23
RNF213-218	ENST00000574060	MMRN1	Q13201	1228 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms