RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 SETD7Q8WTS6 366 aaKnown RBP17.77■□□□□ 0.44
SMG6-214ENST00000573827 ISG20Q96AZ6 181 aaKnown RBP17.77■□□□□ 0.44
SMG6-214ENST00000573827 ELF4Q99607 663 aaPredicted RBP17.77■□□□□ 0.44
SMG6-214ENST00000573827 KLC2Q9H0B6 622 aa17.77■□□□□ 0.44
SMG6-214ENST00000573827 MAGEH1Q9H213 219 aa17.77■□□□□ 0.44
SMG6-214ENST00000573827 IL36AQ9UHA7 158 aa17.77■□□□□ 0.44
SMG6-214ENST00000573827 FZD10Q9ULW2 581 aa17.77■□□□□ 0.44
SMG6-214ENST00000573827 DMTF1Q9Y222 760 aa17.77■□□□□ 0.44
SMG6-214ENST00000573827 MSRB2Q9Y3D2 182 aa17.77■□□□□ 0.44
SMG6-214ENST00000573827 PLXNB3Q9ULL4 1909 aa17.76■□□□□ 0.43
SMG6-214ENST00000573827 WASH4PA8MWX3 477 aa17.76■□□□□ 0.43
SMG6-214ENST00000573827 TLR4O00206 839 aa17.76■□□□□ 0.43
SMG6-214ENST00000573827 KPNA3O00505 521 aaPredicted RBP17.76■□□□□ 0.43
SMG6-214ENST00000573827 KRT37O76014 449 aa17.76■□□□□ 0.43
SMG6-214ENST00000573827 ATXN1LP0C7T5 689 aaKnown RBP17.76■□□□□ 0.43
SMG6-214ENST00000573827 CCDC172P0C7W6 258 aa17.76■□□□□ 0.43
SMG6-214ENST00000573827 MAT2AP31153 395 aaKnown RBP17.76■□□□□ 0.43
SMG6-214ENST00000573827 NUDT1P36639 197 aa17.76■□□□□ 0.43
SMG6-214ENST00000573827 CCNHP51946 323 aaPredicted RBP17.76■□□□□ 0.43
SMG6-214ENST00000573827 IL9RQ01113 521 aa17.76■□□□□ 0.43
SMG6-214ENST00000573827 ZNF284Q2VY69 593 aa17.76■□□□□ 0.43
SMG6-214ENST00000573827 TMEM259Q4ZIN3 620 aa17.76■□□□□ 0.43
SMG6-214ENST00000573827 CARD16Q5EG05 197 aa17.76■□□□□ 0.43
SMG6-214ENST00000573827 NEK5Q6P3R8 708 aa17.76■□□□□ 0.43
SMG6-214ENST00000573827 CYP4V2Q6ZWL3 525 aaPredicted RBP17.76■□□□□ 0.43
SMG6-214ENST00000573827 ERN2Q76MJ5 926 aaKnown RBP17.76■□□□□ 0.43
SMG6-214ENST00000573827 KANSL1Q7Z3B3 1105 aa17.76■□□□□ 0.43
SMG6-214ENST00000573827 ADAT2Q7Z6V5 191 aaKnown RBP17.76■□□□□ 0.43
SMG6-214ENST00000573827 IQCHQ86VS3 1027 aa17.76■□□□□ 0.43
SMG6-214ENST00000573827 RTL3Q8N8U3 475 aaKnown RBP17.76■□□□□ 0.43
SMG6-214ENST00000573827 SAP25Q8TEE9 199 aa17.76■□□□□ 0.43
SMG6-214ENST00000573827 CCDC114Q96M63 670 aa17.76■□□□□ 0.43
SMG6-214ENST00000573827 TRIM7Q9C029 511 aa17.76■□□□□ 0.43
SMG6-214ENST00000573827 HAUS4Q9H6D7 363 aa17.76■□□□□ 0.43
SMG6-214ENST00000573827 ERVMER34-1Q9H9K5 563 aa17.76■□□□□ 0.43
SMG6-214ENST00000573827 CBX8Q9HC52 389 aa17.76■□□□□ 0.43
SMG6-214ENST00000573827 AASDHPPTQ9NRN7 309 aa17.76■□□□□ 0.43
SMG6-214ENST00000573827 ZFR2Q9UPR6 939 aaKnown RBP17.76■□□□□ 0.43
SMG6-214ENST00000573827 CA5BQ9Y2D0 317 aa17.76■□□□□ 0.43
SMG6-214ENST00000573827 TRPM6Q9BX84 2022 aa17.76■□□□□ 0.43
SMG6-214ENST00000573827 A0A1W2PQU0 124 aa17.75■□□□□ 0.43
SMG6-214ENST00000573827 SYCE3A1L190 88 aa17.75■□□□□ 0.43
SMG6-214ENST00000573827 TMEM191CA6NGB0 347 aa17.75■□□□□ 0.43
SMG6-214ENST00000573827 SPINT1O43278 529 aa17.75■□□□□ 0.43
SMG6-214ENST00000573827 ATMINO43313 823 aaPredicted RBP17.75■□□□□ 0.43
SMG6-214ENST00000573827 DFNA5O60443 496 aa17.75■□□□□ 0.43
SMG6-214ENST00000573827 RAMP2O60895 175 aa17.75■□□□□ 0.43
SMG6-214ENST00000573827 RNGTTO60942 597 aaKnown RBP17.75■□□□□ 0.43
SMG6-214ENST00000573827 GZMAP12544 262 aa17.75■□□□□ 0.43
SMG6-214ENST00000573827 TNFAIP3P21580 790 aa17.75■□□□□ 0.43
SMG6-214ENST00000573827 ITGB7P26010 798 aa17.75■□□□□ 0.43
SMG6-214ENST00000573827 ETFBP38117 255 aa17.75■□□□□ 0.43
SMG6-214ENST00000573827 RXRGP48443 463 aa17.75■□□□□ 0.43
SMG6-214ENST00000573827 C21orf59P57076 290 aa17.75■□□□□ 0.43
SMG6-214ENST00000573827 FIGNQ5HY92 759 aa17.75■□□□□ 0.43
SMG6-214ENST00000573827 PRPF39Q86UA1 669 aaKnown RBP17.75■□□□□ 0.43
SMG6-214ENST00000573827 HORMAD1Q86X24 394 aa17.75■□□□□ 0.43
SMG6-214ENST00000573827 RHBDD1Q8TEB9 315 aa17.75■□□□□ 0.43
SMG6-214ENST00000573827 PEBP4Q96S96 227 aa17.75■□□□□ 0.43
SMG6-214ENST00000573827 HEPHQ9BQS7 1158 aa17.75■□□□□ 0.43
SMG6-214ENST00000573827 EDEM3Q9BZQ6 932 aa17.75■□□□□ 0.43
SMG6-214ENST00000573827 PCDHB9Q9Y5E1 797 aa17.75■□□□□ 0.43
SMG6-214ENST00000573827 PTPRBP23467 1997 aa17.75■□□□□ 0.43
SMG6-214ENST00000573827 TMCO5BA8MYB1 307 aa17.74■□□□□ 0.43
SMG6-214ENST00000573827 KDELR3O43731 214 aa17.74■□□□□ 0.43
SMG6-214ENST00000573827 EPHA8P29322 1005 aaPredicted RBP17.74■□□□□ 0.43
SMG6-214ENST00000573827 GKP32189 559 aa17.74■□□□□ 0.43
SMG6-214ENST00000573827 GRK6P43250 576 aa17.74■□□□□ 0.43
SMG6-214ENST00000573827 AIF1P55008 147 aa17.74■□□□□ 0.43
SMG6-214ENST00000573827 FGL2Q14314 439 aa17.74■□□□□ 0.43
SMG6-214ENST00000573827 SUZ12Q15022 739 aaKnown RBP17.74■□□□□ 0.43
SMG6-214ENST00000573827 ASIC2Q16515 512 aa17.74■□□□□ 0.43
SMG6-214ENST00000573827 SFMBT2Q5VUG0 894 aa17.74■□□□□ 0.43
SMG6-214ENST00000573827 HGSNATQ68CP4 663 aa17.74■□□□□ 0.43
SMG6-214ENST00000573827 PARS2Q7L3T8 475 aaKnown RBP17.74■□□□□ 0.43
SMG6-214ENST00000573827 TMC6Q7Z403 805 aa17.74■□□□□ 0.43
SMG6-214ENST00000573827 GATAD2AQ86YP4 633 aa17.74■□□□□ 0.43
SMG6-214ENST00000573827 UMODL1-AS1Q8N2C9 162 aa17.74■□□□□ 0.43
SMG6-214ENST00000573827 CDC6Q99741 560 aa17.74■□□□□ 0.43
SMG6-214ENST00000573827 TM6SF2Q9BZW4 377 aa17.74■□□□□ 0.43
SMG6-214ENST00000573827 GDF3Q9NR23 364 aa17.74■□□□□ 0.43
SMG6-214ENST00000573827 FARP1Q9Y4F1 1045 aaPredicted RBP17.74■□□□□ 0.43
SMG6-214ENST00000573827 FADS3Q9Y5Q0 445 aa17.74■□□□□ 0.43
SMG6-214ENST00000573827 COL5A1P20908 1838 aaPredicted RBP17.74■□□□□ 0.43
SMG6-214ENST00000573827 PRAMEF26H0Y7S4 382 aa17.73■□□□□ 0.43
SMG6-214ENST00000573827 GSRP00390 522 aa17.73■□□□□ 0.43
SMG6-214ENST00000573827 ADRB3P13945 408 aa17.73■□□□□ 0.43
SMG6-214ENST00000573827 PRLRP16471 622 aa17.73■□□□□ 0.43
SMG6-214ENST00000573827 EPHB2P29323 1055 aa17.73■□□□□ 0.43
SMG6-214ENST00000573827 OVGP1Q12889 678 aa17.73■□□□□ 0.43
SMG6-214ENST00000573827 POLD3Q15054 466 aaPredicted RBP17.73■□□□□ 0.43
SMG6-214ENST00000573827 CA9Q16790 459 aa17.73■□□□□ 0.43
SMG6-214ENST00000573827 FILIP1LQ4L180 1135 aa17.73■□□□□ 0.43
SMG6-214ENST00000573827 SETMARQ53H47 684 aaPredicted RBP17.73■□□□□ 0.43
SMG6-214ENST00000573827 EFHC2Q5JST6 749 aa17.73■□□□□ 0.43
SMG6-214ENST00000573827 SEL1L3Q68CR1 1132 aa17.73■□□□□ 0.43
SMG6-214ENST00000573827 SCYL2Q6P3W7 929 aa17.73■□□□□ 0.43
SMG6-214ENST00000573827 DCUN1D2Q6PH85 259 aa17.73■□□□□ 0.43
SMG6-214ENST00000573827 LEKR1Q6ZMV7 388 aa17.73■□□□□ 0.43
SMG6-214ENST00000573827 LUZP1Q86V48 1076 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms