RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 ENDOD1O94919 500 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 PAK4O96013 591 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 ADRB3P13945 408 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 NME1P15531 152 aaKnown RBP10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 TFE3P19532 575 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 ITGB7P26010 798 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 OR1E1P30953 314 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 RABIFP47224 123 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 SULT1E1P49888 294 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 SERPINH1P50454 418 aaKnown RBP10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 RNASE9P60153 205 aaKnown RBP10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 DEUP1Q05D60 604 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 SLC20A2Q08357 652 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 MAPK8IP2Q13387 824 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 FGL2Q14314 439 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 EXOC3L4Q17RC7 722 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 ISXQ2M1V0 245 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 PTPN20Q4JDL3 420 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 ARHGAP40Q5TG30 622 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 RETSATQ6NUM9 610 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 ZCCHC8Q6NZY4 707 aaKnown RBP10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 IGF2-ASQ6U949 168 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 ZNF783Q6ZMS7 281 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 GBP6Q6ZN66 633 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 TFAP2DQ7Z6R9 452 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 ZSCAN30Q86W11 494 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 PARGQ86W56 976 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 ZNF548Q8NEK5 533 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 COL26A1Q96A83 441 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 LENG8Q96PV6 779 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 HEPHQ9BQS7 1158 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 SPON2Q9BUD6 331 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 CEP44Q9C0F1 390 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 CPNE5Q9HCH3 593 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 ASCL3Q9NQ33 180 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 MPP6Q9NZW5 540 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 STAP1Q9ULZ2 295 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 FADS3Q9Y5Q0 445 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 SNX10Q9Y5X0 201 aa10.07□□□□□ -0.8
TRAPPC1-205ENST00000572656 ASXL3Q9C0F0 2248 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 GTPBP10A4D1E9 387 aaKnown RBP10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 H3BM21 787 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 J3QKU1 62 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 FPGTO14772 594 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 RAD51BO15315 384 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 KLK10O43240 276 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 AQP9O43315 295 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 ZMPSTE24O75844 475 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 TGM2P21980 687 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 PON1P27169 355 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 RBMS1P29558 406 aaKnown RBP10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 L1CAMP32004 1257 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 CLCN1P35523 988 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 SCNN1AP37088 669 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 SGCGQ13326 291 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 CDKN3Q16667 212 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 SLC25A52Q3SY17 297 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 CARD16Q5EG05 197 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 ARTNQ5T4W7 220 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 SLC47A2Q86VL8 602 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 CREBRFQ8IUR6 639 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 PCDH20Q8N6Y1 951 aaKnown RBP10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 OR7D4Q8NG98 312 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 TPCN2Q8NHX9 752 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 SNRNP27Q8WVK2 155 aaKnown RBP10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 VCPIP1Q96JH7 1222 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 SLC46A1Q96NT5 459 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 HAPLN3Q96S86 360 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 TBCBQ99426 244 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 KLF6Q99612 283 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 C1QTNF2Q9BXJ5 285 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 PLCB1Q9NQ66 1216 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 ZNF212Q9UDV6 495 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 IPO11Q9UI26 975 aaKnown RBP10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 KLF15Q9UIH9 416 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 RWDD2AQ9UIY3 292 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 SALL4Q9UJQ4 1053 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 SSUH2Q9Y2M2 353 aa10.06□□□□□ -0.8
TRAPPC1-205ENST00000572656 ZNF462Q96JM2 2506 aa10.05□□□□□ -0.8
TRAPPC1-205ENST00000572656 CPED1A4D0V7 1026 aa10.05□□□□□ -0.8
TRAPPC1-205ENST00000572656 EME2A4GXA9 379 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC1-205ENST00000572656 IGLON5A6NGN9 336 aa10.05□□□□□ -0.8
TRAPPC1-205ENST00000572656 FOXN3O00409 490 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC1-205ENST00000572656 TPP1O14773 563 aa10.05□□□□□ -0.8
TRAPPC1-205ENST00000572656 TSPAN6O43657 245 aa10.05□□□□□ -0.8
TRAPPC1-205ENST00000572656 SRGAP2O75044 1071 aa10.05□□□□□ -0.8
TRAPPC1-205ENST00000572656 JUNDP17535 347 aa10.05□□□□□ -0.8
TRAPPC1-205ENST00000572656 GABRB2P47870 512 aa10.05□□□□□ -0.8
TRAPPC1-205ENST00000572656 DNA2P51530 1060 aa10.05□□□□□ -0.8
TRAPPC1-205ENST00000572656 CCNHP51946 323 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC1-205ENST00000572656 BPIFB4P59827 614 aa10.05□□□□□ -0.8
TRAPPC1-205ENST00000572656 GNA12Q03113 381 aa10.05□□□□□ -0.8
TRAPPC1-205ENST00000572656 VAC14Q08AM6 782 aa10.05□□□□□ -0.8
TRAPPC1-205ENST00000572656 PDE1CQ14123 709 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC1-205ENST00000572656 DEFB133Q30KQ1 61 aa10.05□□□□□ -0.8
TRAPPC1-205ENST00000572656 GUSBP11Q6P575 273 aa10.05□□□□□ -0.8
TRAPPC1-205ENST00000572656 RBM44Q6ZP01 1051 aaKnown RBP10.05□□□□□ -0.8
TRAPPC1-205ENST00000572656 PARS2Q7L3T8 475 aaKnown RBP10.05□□□□□ -0.8
TRAPPC1-205ENST00000572656 EFL1Q7Z2Z2 1120 aaKnown RBP10.05□□□□□ -0.8
TRAPPC1-205ENST00000572656 PLPP6Q8IY26 295 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms