RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 TRPC7Q9HCX4 862 aa17.05■□□□□ 0.32
LITAF-209ENST00000571688 MAFBQ9Y5Q3 323 aaPredicted RBP17.05■□□□□ 0.32
LITAF-209ENST00000571688 BAATQ14032 418 aaPredicted RBP17.04■□□□□ 0.32
LITAF-209ENST00000571688 FAM182BQ5T319 152 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 FAM117BQ6P1L5 589 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 OLFML1Q6UWY5 402 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 ACVR1CQ8NER5 493 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 CANT1Q8WVQ1 401 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 CASP10Q92851 521 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 ZNF669Q96BR6 464 aaPredicted RBP17.04■□□□□ 0.32
LITAF-209ENST00000571688 TASP1Q9H6P5 420 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 VRTNQ9H8Y1 702 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 GIN1Q9NXP7 522 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 TMEM181Q9P2C4 612 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 GTF2IRD1Q9UHL9 959 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 MFHAS1Q9Y4C4 1052 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 PSME4Q14997 1843 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 CLRN2A0PK11 232 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 DYNC1LI2O43237 492 aaPredicted RBP17.04■□□□□ 0.32
LITAF-209ENST00000571688 CNOT3O75175 753 aaKnown RBP17.04■□□□□ 0.32
LITAF-209ENST00000571688 SEC24DO94855 1032 aaPredicted RBP17.04■□□□□ 0.32
LITAF-209ENST00000571688 TFE3P19532 575 aaPredicted RBP17.04■□□□□ 0.32
LITAF-209ENST00000571688 GTF2A2P52657 109 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 CD300CQ08708 224 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 MAPRE2Q15555 327 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 DGKDQ16760 1214 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.04■□□□□ 0.32
LITAF-209ENST00000571688 KHSRPQ92945 711 aaKnown RBP eCLIP17.04■□□□□ 0.32
LITAF-209ENST00000571688 CSPG4P5Q96PW8 444 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 MCMBPQ9BTE3 642 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 FTHL17Q9BXU8 183 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 EIF2AQ9BY44 585 aaKnown RBP17.04■□□□□ 0.32
LITAF-209ENST00000571688 MAGEB5Q9BZ81 275 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 MUC3BQ9H195 1237 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 GGA3Q9NZ52 723 aa17.04■□□□□ 0.32
LITAF-209ENST00000571688 GOLGA8TH3BQL2 631 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 TIMM44O43615 452 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 ZNF182P17025 639 aaPredicted RBP17.03■□□□□ 0.32
LITAF-209ENST00000571688 PSMB4P28070 264 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 GRM5P41594 1212 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 FSTL1Q12841 308 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 FRG1Q14331 258 aaKnown RBP17.03■□□□□ 0.32
LITAF-209ENST00000571688 SAMD4BQ5PRF9 694 aaKnown RBP17.03■□□□□ 0.32
LITAF-209ENST00000571688 SNRNP48Q6IEG0 339 aaKnown RBP17.03■□□□□ 0.32
LITAF-209ENST00000571688 KCTD8Q6ZWB6 473 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 DPH6Q7L8W6 267 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 DHFR2Q86XF0 187 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 CDAN1Q8IWY9 1227 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 ANKRD52Q8NB46 1076 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 OR2T34Q8NGX1 318 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 OR2T3Q8NH03 318 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 CXorf38Q8TB03 319 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 C17orf50Q8WW18 174 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 SNX27Q96L92 541 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 HEXIM2Q96MH2 286 aaKnown RBP17.03■□□□□ 0.32
LITAF-209ENST00000571688 LGMNQ99538 433 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 OLFM1Q99784 485 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 UPF3AQ9H1J1 476 aaKnown RBP17.03■□□□□ 0.32
LITAF-209ENST00000571688 ADAMTS10Q9H324 1103 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 LRRC40Q9H9A6 602 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 ZNF302Q9NR11 478 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 CNTNAP1P78357 1384 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 COL11A2P13942 1736 aaPredicted RBP17.03■□□□□ 0.32
LITAF-209ENST00000571688 ZCWPW2A0A1B0GU75 182 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 TMEM233B4DJY2 109 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 PFKMP08237 780 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 CSE1LP55060 971 aaKnown RBP17.03■□□□□ 0.32
LITAF-209ENST00000571688 ZBTB17Q13105 803 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 LRRC8EQ6NSJ5 796 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 C8orf82Q6P1X6 216 aaPredicted RBP17.03■□□□□ 0.32
LITAF-209ENST00000571688 ZC3H7AQ8IWR0 971 aaKnown RBP17.03■□□□□ 0.32
LITAF-209ENST00000571688 TMEM130Q8N3G9 435 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 PCYOX1LQ8NBM8 494 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 STYXQ8WUJ0 223 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 KCTD15Q96SI1 283 aaPredicted RBP17.03■□□□□ 0.32
LITAF-209ENST00000571688 TUBA1CQ9BQE3 449 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 SFMBT1Q9UHJ3 866 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 ANKRD6Q9Y2G4 727 aa17.03■□□□□ 0.32
LITAF-209ENST00000571688 TRPC5OSA6NMA1 111 aa17.02■□□□□ 0.32
LITAF-209ENST00000571688 RNF103O00237 685 aa17.02■□□□□ 0.32
LITAF-209ENST00000571688 CCNA2P20248 432 aa17.02■□□□□ 0.32
LITAF-209ENST00000571688 TRAF2Q12933 501 aa17.02■□□□□ 0.32
LITAF-209ENST00000571688 NME3Q13232 169 aa17.02■□□□□ 0.32
LITAF-209ENST00000571688 TMEM135Q86UB9 458 aa17.02■□□□□ 0.32
LITAF-209ENST00000571688 C1orf50Q9BV19 199 aa17.02■□□□□ 0.32
LITAF-209ENST00000571688 NIFKQ9BYG3 293 aaKnown RBP17.02■□□□□ 0.32
LITAF-209ENST00000571688 CD320Q9NPF0 282 aa17.02■□□□□ 0.32
LITAF-209ENST00000571688 CCM2LQ9NUG4 571 aaPredicted RBP17.02■□□□□ 0.32
LITAF-209ENST00000571688 ATAD3AQ9NVI7 634 aa17.02■□□□□ 0.32
LITAF-209ENST00000571688 TSC22D4Q9Y3Q8 395 aa17.02■□□□□ 0.32
LITAF-209ENST00000571688 TCAF1Q9Y4C2 921 aa17.02■□□□□ 0.32
LITAF-209ENST00000571688 KRBA1A5PL33 1030 aa17.02■□□□□ 0.32
LITAF-209ENST00000571688 TARM1B6A8C7 271 aa17.02■□□□□ 0.32
LITAF-209ENST00000571688 NOL3O60936 208 aaKnown RBP17.02■□□□□ 0.32
LITAF-209ENST00000571688 DDHD2O94830 711 aa17.02■□□□□ 0.32
LITAF-209ENST00000571688 ATP6V1B2P21281 511 aa17.02■□□□□ 0.32
LITAF-209ENST00000571688 GRIA3P42263 894 aa17.02■□□□□ 0.32
LITAF-209ENST00000571688 RGS7P49802 495 aa17.02■□□□□ 0.32
LITAF-209ENST00000571688 EFNA5P52803 228 aa17.02■□□□□ 0.32
LITAF-209ENST00000571688 GNA12Q03113 381 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms