RNA–Protein interactions for RNA: ENST00000570557.5

CHRNB1-203, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 5

Gene CHRNB1, Length 947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-203ENST00000570557 CCDC114Q96M63 670 aa13.2□□□□□ -0.3
CHRNB1-203ENST00000570557 HEPHQ9BQS7 1158 aa13.2□□□□□ -0.3
CHRNB1-203ENST00000570557 RTKNQ9BST9 563 aa13.2□□□□□ -0.3
CHRNB1-203ENST00000570557 NUSAP1Q9BXS6 441 aaKnown RBP13.2□□□□□ -0.3
CHRNB1-203ENST00000570557 DEF6Q9H4E7 631 aa13.2□□□□□ -0.3
CHRNB1-203ENST00000570557 PCDH18Q9HCL0 1135 aa13.2□□□□□ -0.3
CHRNB1-203ENST00000570557 SUSD2Q9UGT4 822 aa13.2□□□□□ -0.3
CHRNB1-203ENST00000570557 IL36AQ9UHA7 158 aa13.2□□□□□ -0.3
CHRNB1-203ENST00000570557 EIF2B4Q9UI10 523 aaKnown RBP13.2□□□□□ -0.3
CHRNB1-203ENST00000570557 HPCAL4Q9UM19 191 aa13.2□□□□□ -0.3
CHRNB1-203ENST00000570557 FARP1Q9Y4F1 1045 aaPredicted RBP13.2□□□□□ -0.3
CHRNB1-203ENST00000570557 PLXNA2O75051 1894 aa13.2□□□□□ -0.3
CHRNB1-203ENST00000570557 ASCC3Q8N3C0 2202 aaKnown RBP13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 A0A1B0GTW7 788 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 LRRC72A6NJI9 287 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 MEI4A8MW99 385 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 J3KR12 359 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 BUB1O43683 1085 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 PRAMEF11O60813 436 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 LEFTY1O75610 366 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 TMCC1O94876 653 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 ENGP17813 658 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 CD27P26842 260 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 PAPOLAP51003 745 aaKnown RBP13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 CCNHP51946 323 aaPredicted RBP13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 TAS2R40P59535 323 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 BNC1Q01954 994 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 CYTH1Q15438 398 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 ATP13A4Q4VNC1 1196 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 TP53INP2Q8IXH6 220 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 RGL4Q8IZJ4 473 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 LZTR1Q8N653 840 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 OR2AP1Q8NGE2 309 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 HSPH1Q92598 858 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 LRIG1Q96JA1 1093 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 CSPG4P5Q96PW8 444 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 PANX2Q96RD6 677 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 EDEM2Q9BV94 578 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 HDAC8Q9BY41 377 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 ZWILCHQ9H900 591 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 ETNK2Q9NVF9 386 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 RCOR3Q9P2K3 495 aaPredicted RBP13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 HECAQ9UBI9 543 aaPredicted RBP13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 LHX3Q9UBR4 397 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 CDV3Q9UKY7 258 aaKnown RBP13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 TPX2Q9ULW0 747 aaKnown RBP13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 MFHAS1Q9Y4C4 1052 aa13.19□□□□□ -0.3
CHRNB1-203ENST00000570557 A0A1W2PPC4 97 aa13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 ARHGAP42A6NI28 874 aa13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 H3BRJ5 948 aa13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 ARHGAP33O14559 1287 aa13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 BCAT2O15382 392 aaPredicted RBP13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 BNIP3LO60238 219 aa13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 GJB3O75712 270 aa13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 GNSP15586 552 aa13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 AMPD1P23109 780 aa13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 ARHGAP25P42331 645 aa13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 RECQLP46063 649 aaPredicted RBP13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 HADHBP55084 474 aaKnown RBP13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 SNRPD1P62314 119 aaKnown RBP13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 MYLK3Q32MK0 819 aa13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 LEKR1Q6ZMV7 388 aa13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 TRIM69Q86WT6 500 aa13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 RHOT2Q8IXI1 618 aa13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 CCDC170Q8IYT3 715 aa13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 ZCCHC9Q8N567 271 aaKnown RBP13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 OR14C36Q8NHC7 312 aa13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 GANCQ8TET4 914 aa13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 RFFLQ8WZ73 363 aa13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 CELF6Q96J87 481 aaKnown RBP13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 FSCN3Q9NQT6 498 aa13.18□□□□□ -0.3
CHRNB1-203ENST00000570557 C4orf47A7E2U8 309 aa13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 DAPK3O43293 454 aa13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 FSBPO95073 299 aa13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 POP4O95707 220 aaKnown RBP13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 PEX11BO96011 259 aa13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 CFIP05156 583 aa13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 CD48P09326 243 aa13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 ITGB7P26010 798 aa13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 ARL4AP40617 200 aa13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 PPP2CBP62714 309 aa13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 PPP2CAP67775 309 aa13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 DPYSL3Q14195 570 aa13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 HADHQ16836 314 aaKnown RBP13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 POM121L1PQ3SYA9 428 aa13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 NEK5Q6P3R8 708 aa13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 ARHGAP36Q6ZRI8 547 aa13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 ERN2Q76MJ5 926 aaKnown RBP13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 FAF2Q96CS3 445 aa13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 CPEB1Q9BZB8 566 aaKnown RBP13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 TM6SF2Q9BZW4 377 aa13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 PREBQ9HCU5 417 aa13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 TM9SF3Q9HD45 589 aa13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 TMEM9BQ9NQ34 198 aa13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 DNAAF2Q9NVR5 837 aaKnown RBP13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 UBA2Q9UBT2 640 aaPredicted RBP13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 KNL1Q8NG31 2342 aa13.17□□□□□ -0.3
CHRNB1-203ENST00000570557 CACNA1AO00555 2505 aa13.16□□□□□ -0.3
CHRNB1-203ENST00000570557 UPK3BL1B0FP48 263 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms