RNA–Protein interactions for RNA: ENST00000569961.5

CCDC187-203, Transcript of coiled-coil domain containing 187, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC187, Length 3,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-203ENST00000569961 SERPINB11Q96P15 392 aa14.28□□□□□ -0.12
CCDC187-203ENST00000569961 TBL1YQ9BQ87 522 aa14.28□□□□□ -0.12
CCDC187-203ENST00000569961 OSBPL1AQ9BXW6 950 aa14.28□□□□□ -0.12
CCDC187-203ENST00000569961 FRMD8P1Q9BZ68 369 aaPredicted RBP14.28□□□□□ -0.12
CCDC187-203ENST00000569961 TLR8Q9NR97 1041 aaKnown RBP14.28□□□□□ -0.12
CCDC187-203ENST00000569961 COL6A3P12111 3177 aa14.28□□□□□ -0.12
CCDC187-203ENST00000569961 TMEM233B4DJY2 109 aa14.28□□□□□ -0.12
CCDC187-203ENST00000569961 CYP11A1P05108 521 aa14.28□□□□□ -0.12
CCDC187-203ENST00000569961 CKMP06732 381 aa14.28□□□□□ -0.12
CCDC187-203ENST00000569961 TROVE2P10155 538 aaKnown RBP eCLIP14.28□□□□□ -0.12
CCDC187-203ENST00000569961 MBL2P11226 248 aaPredicted RBP14.28□□□□□ -0.12
CCDC187-203ENST00000569961 ITGB6P18564 788 aa14.28□□□□□ -0.12
CCDC187-203ENST00000569961 ELF1P32519 619 aa14.28□□□□□ -0.12
CCDC187-203ENST00000569961 GLUD2P49448 558 aa14.28□□□□□ -0.12
CCDC187-203ENST00000569961 GALNT2Q10471 571 aa14.28□□□□□ -0.12
CCDC187-203ENST00000569961 ZNF235Q14590 738 aa14.28□□□□□ -0.12
CCDC187-203ENST00000569961 CACUL1Q86Y37 369 aa14.28□□□□□ -0.12
CCDC187-203ENST00000569961 RELL1Q8IUW5 271 aa14.28□□□□□ -0.12
CCDC187-203ENST00000569961 VPS39Q96JC1 886 aa14.28□□□□□ -0.12
CCDC187-203ENST00000569961 TRIM55Q9BYV6 548 aa14.28□□□□□ -0.12
CCDC187-203ENST00000569961 GBA3Q9H227 469 aa14.28□□□□□ -0.12
CCDC187-203ENST00000569961 CATSPERBQ9H7T0 1116 aa14.28□□□□□ -0.12
CCDC187-203ENST00000569961 GLOD4Q9HC38 313 aa14.28□□□□□ -0.12
CCDC187-203ENST00000569961 PRM3Q9NNZ6 103 aa14.28□□□□□ -0.12
CCDC187-203ENST00000569961 PLLPQ9Y342 182 aa14.28□□□□□ -0.12
CCDC187-203ENST00000569961 CCDC189A1A4V9 331 aa14.27□□□□□ -0.12
CCDC187-203ENST00000569961 E9PBE3 544 aa14.27□□□□□ -0.12
CCDC187-203ENST00000569961 KLHL41O60662 606 aa14.27□□□□□ -0.12
CCDC187-203ENST00000569961 TCEA3O75764 348 aa14.27□□□□□ -0.12
CCDC187-203ENST00000569961 OAZ2O95190 189 aa14.27□□□□□ -0.12
CCDC187-203ENST00000569961 ZWINTO95229 277 aa14.27□□□□□ -0.12
CCDC187-203ENST00000569961 C2P06681 752 aa14.27□□□□□ -0.12
CCDC187-203ENST00000569961 RAG1P15918 1043 aa14.27□□□□□ -0.12
CCDC187-203ENST00000569961 CTPS1P17812 591 aa14.27□□□□□ -0.12
CCDC187-203ENST00000569961 NCALDP61601 193 aa14.27□□□□□ -0.12
CCDC187-203ENST00000569961 THOC5Q13769 683 aaKnown RBP14.27□□□□□ -0.12
CCDC187-203ENST00000569961 ATXN7L2Q5T6C5 722 aaPredicted RBP14.27□□□□□ -0.12
CCDC187-203ENST00000569961 DTX3LQ8TDB6 740 aa14.27□□□□□ -0.12
CCDC187-203ENST00000569961 PPP4R1Q8TF05 950 aa14.27□□□□□ -0.12
CCDC187-203ENST00000569961 CCDC124Q96CT7 223 aaKnown RBP14.27□□□□□ -0.12
CCDC187-203ENST00000569961 LRRC40Q9H9A6 602 aa14.27□□□□□ -0.12
CCDC187-203ENST00000569961 ARL8BQ9NVJ2 186 aa14.27□□□□□ -0.12
CCDC187-203ENST00000569961 SLC38A8A6NNN8 435 aa14.27□□□□□ -0.13
CCDC187-203ENST00000569961 PER2O15055 1255 aa14.27□□□□□ -0.13
CCDC187-203ENST00000569961 AHSGP02765 367 aa14.27□□□□□ -0.13
CCDC187-203ENST00000569961 SKIP12755 728 aa14.27□□□□□ -0.13
CCDC187-203ENST00000569961 CST5P28325 142 aaPredicted RBP14.27□□□□□ -0.13
CCDC187-203ENST00000569961 CORO1AP31146 461 aaKnown RBP14.27□□□□□ -0.13
CCDC187-203ENST00000569961 ARRB2P32121 409 aa14.27□□□□□ -0.13
CCDC187-203ENST00000569961 HDAC10Q969S8 669 aa14.27□□□□□ -0.13
CCDC187-203ENST00000569961 RTP4Q96DX8 246 aa14.27□□□□□ -0.13
CCDC187-203ENST00000569961 SLC45A3Q96JT2 553 aa14.27□□□□□ -0.13
CCDC187-203ENST00000569961 TBATAQ96M53 351 aa14.27□□□□□ -0.13
CCDC187-203ENST00000569961 SMOC2Q9H3U7 446 aa14.27□□□□□ -0.13
CCDC187-203ENST00000569961 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.27□□□□□ -0.13
CCDC187-203ENST00000569961 KANSL3Q9P2N6 904 aa14.27□□□□□ -0.13
CCDC187-203ENST00000569961 FAM50BQ9Y247 325 aa14.27□□□□□ -0.13
CCDC187-203ENST00000569961 COCHO43405 550 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 PDHA1P08559 390 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 HNRNPLP14866 589 aaKnown RBP eCLIP14.26□□□□□ -0.13
CCDC187-203ENST00000569961 GABRB3P28472 473 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 IRF5Q13568 498 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 FSCBQ5H9T9 825 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 NAIF1Q69YI7 327 aaPredicted RBP14.26□□□□□ -0.13
CCDC187-203ENST00000569961 CYB5D1Q6P9G0 228 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 TMC7Q7Z402 723 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 HS6ST3Q8IZP7 471 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 RIBC1Q8N443 379 aaPredicted RBP14.26□□□□□ -0.13
CCDC187-203ENST00000569961 WDR55Q9H6Y2 383 aaPredicted RBP14.26□□□□□ -0.13
CCDC187-203ENST00000569961 HCFC1R1Q9NWW0 138 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 UTP6Q9NYH9 597 aaKnown RBP14.26□□□□□ -0.13
CCDC187-203ENST00000569961 CDH22Q9UJ99 828 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 RUVBL2Q9Y230 463 aaKnown RBP14.26□□□□□ -0.13
CCDC187-203ENST00000569961 ZCWPW2A0A1B0GU75 182 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 FAM159BA6NKW6 160 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 C9JVG2 144 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 SKAP2O75563 359 aaPredicted RBP14.26□□□□□ -0.13
CCDC187-203ENST00000569961 TPSB2P20231 275 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 CDKN1CP49918 316 aaPredicted RBP14.26□□□□□ -0.13
CCDC187-203ENST00000569961 STX3Q13277 289 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 TPSAB1Q15661 275 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 CEP97Q8IW35 865 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 ZNF366Q8N895 744 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 NTAN1Q96AB6 310 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 CLSTN3Q9BQT9 956 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 ZYG11BQ9C0D3 744 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 TLE6Q9H808 572 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 KLC4Q9NSK0 619 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 TRIOBPQ9H2D6 2365 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 TRIM24O15164 1050 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 PRPF4O43172 522 aaKnown RBP eCLIP14.26□□□□□ -0.13
CCDC187-203ENST00000569961 RFPL2O75678 378 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 MYL4P12829 197 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 ALDH3A1P30838 453 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 ABL2P42684 1182 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 NAGLUP54802 743 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 PRAMEP78395 509 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 SMAD3P84022 425 aaKnown RBP14.26□□□□□ -0.13
CCDC187-203ENST00000569961 CDH17Q12864 832 aa14.26□□□□□ -0.13
CCDC187-203ENST00000569961 IKBKEQ14164 716 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms