RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 SRGAP2O75044 1071 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 PRNPP04156 253 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 ALPPL2P10696 532 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 TMPRSS3P57727 454 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 SLC6A3Q01959 620 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 C1orf61Q13536 156 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 MEA1Q16626 185 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 ISXQ2M1V0 245 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 RAB6CQ53S08 254 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 ARTNQ5T4W7 220 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 LEKR1Q6ZMV7 388 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 PARS2Q7L3T8 475 aaKnown RBP12.32□□□□□ -0.44
CAPN3-220ENST00000569827 SLC47A2Q86VL8 602 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 CACTIN-AS1Q8N1I8 211 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 DCAF4L2Q8NA75 395 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 NETO2Q8NC67 525 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 LMX1AQ8TE12 382 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 CCDC114Q96M63 670 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 TIGD1Q96MW7 591 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 ZNF578Q96N58 590 aaPredicted RBP12.32□□□□□ -0.44
CAPN3-220ENST00000569827 C2orf49Q9BVC5 232 aaPredicted RBP12.32□□□□□ -0.44
CAPN3-220ENST00000569827 RAB6CQ9H0N0 254 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 ABCG4Q9H172 646 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 ZDHHC6Q9H6R6 413 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 WDCPQ9H6R7 721 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 POLR1BQ9H9Y6 1135 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 ASNSD1Q9NWL6 643 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 ARHGEF38Q9NXL2 777 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 HOOK1Q9UJC3 728 aaKnown RBP12.32□□□□□ -0.44
CAPN3-220ENST00000569827 PNMA8BQ9ULN7 279 aaPredicted RBP12.32□□□□□ -0.44
CAPN3-220ENST00000569827 FARP1Q9Y4F1 1045 aaPredicted RBP12.32□□□□□ -0.44
CAPN3-220ENST00000569827 PTPN13Q12923 2485 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 DOPEY2Q9Y3R5 2298 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 J3QKU1 62 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 ERVH48-1M5A8F1 160 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 SCAMP1O15126 338 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 MUSKO15146 869 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 GADD45BO75293 160 aaPredicted RBP12.31□□□□□ -0.44
CAPN3-220ENST00000569827 GLI1P08151 1106 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 ADRB3P13945 408 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 NOS2P35228 1153 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 ABL2P42684 1182 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 LSSP48449 732 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 NEK3P51956 506 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 MARSP56192 900 aaKnown RBP12.31□□□□□ -0.44
CAPN3-220ENST00000569827 ARF5P84085 180 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 C1QBPQ07021 282 aaKnown RBP12.31□□□□□ -0.44
CAPN3-220ENST00000569827 PDE1CQ14123 709 aaPredicted RBP12.31□□□□□ -0.44
CAPN3-220ENST00000569827 C5orf22Q49AR2 442 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 BROXQ5VW32 411 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 TRNP1Q6NT89 227 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 NYAP1Q6ZVC0 841 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 SLC26A9Q7LBE3 791 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 DRC7Q8IY82 874 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 TMIEQ8NEW7 156 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 SHC3Q92529 594 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 PPP1R9BQ96SB3 815 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 NPY6RQ99463 290 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 HDAC8Q9BY41 377 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 SLC17A9Q9BYT1 436 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 SIX2Q9NPC8 291 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 GPR27Q9NS67 375 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 APEX2Q9UBZ4 518 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 PCDHGC3Q9UN70 934 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 ENTPD2Q9Y5L3 495 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 FADS3Q9Y5Q0 445 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 SPTA1P02549 2419 aa12.31□□□□□ -0.44
CAPN3-220ENST00000569827 TLN1Q9Y490 2541 aaKnown RBP12.31□□□□□ -0.44
CAPN3-220ENST00000569827 IGLON5A6NGN9 336 aa12.3□□□□□ -0.44
CAPN3-220ENST00000569827 GOLGA8SH3BPF8 625 aa12.3□□□□□ -0.44
CAPN3-220ENST00000569827 AQP9O43315 295 aa12.3□□□□□ -0.44
CAPN3-220ENST00000569827 ZMPSTE24O75844 475 aa12.3□□□□□ -0.44
CAPN3-220ENST00000569827 GNA14O95837 355 aa12.3□□□□□ -0.44
CAPN3-220ENST00000569827 CELA2BP08218 269 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-220ENST00000569827 NME1P15531 152 aaKnown RBP12.3□□□□□ -0.44
CAPN3-220ENST00000569827 JUNDP17535 347 aa12.3□□□□□ -0.44
CAPN3-220ENST00000569827 OR1E1P30953 314 aa12.3□□□□□ -0.44
CAPN3-220ENST00000569827 CLCN1P35523 988 aa12.3□□□□□ -0.44
CAPN3-220ENST00000569827 FLT3P36888 993 aa12.3□□□□□ -0.44
CAPN3-220ENST00000569827 ACVRL1P37023 503 aa12.3□□□□□ -0.44
CAPN3-220ENST00000569827 RECQLP46063 649 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-220ENST00000569827 CXCR3P49682 368 aa12.3□□□□□ -0.44
CAPN3-220ENST00000569827 SERPINH1P50454 418 aaKnown RBP12.3□□□□□ -0.44
CAPN3-220ENST00000569827 CCNHP51946 323 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-220ENST00000569827 HNRNPKP61978 463 aaKnown RBP eCLIP12.3□□□□□ -0.44
CAPN3-220ENST00000569827 DEUP1Q05D60 604 aa12.3□□□□□ -0.44
CAPN3-220ENST00000569827 EIF2B5Q13144 721 aaKnown RBP12.3□□□□□ -0.44
CAPN3-220ENST00000569827 FAM102AQ5T9C2 384 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-220ENST00000569827 TAF3Q5VWG9 929 aa12.3□□□□□ -0.44
CAPN3-220ENST00000569827 NEK5Q6P3R8 708 aa12.3□□□□□ -0.44
CAPN3-220ENST00000569827 KYAT3Q6YP21 454 aaKnown RBP12.3□□□□□ -0.44
CAPN3-220ENST00000569827 PARGQ86W56 976 aa12.3□□□□□ -0.44
CAPN3-220ENST00000569827 FAM131BQ86XD5 332 aa12.3□□□□□ -0.44
CAPN3-220ENST00000569827 RYBPQ8N488 228 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-220ENST00000569827 FAM181AQ8N9Y4 354 aa12.3□□□□□ -0.44
CAPN3-220ENST00000569827 KLF6Q99612 283 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-220ENST00000569827 MAGEB5Q9BZ81 275 aa12.3□□□□□ -0.44
CAPN3-220ENST00000569827 ATP13A1Q9HD20 1204 aa12.3□□□□□ -0.44
CAPN3-220ENST00000569827 NDFIP2Q9NV92 336 aa12.3□□□□□ -0.44
CAPN3-220ENST00000569827 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms