RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 POMPQ9Y244 141 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 CDC42BPBQ9Y5S2 1711 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 TDP2O95551 362 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 CRTAMO95727 393 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 PGRP06401 933 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 GLDCP23378 1020 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 ETFBP38117 255 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 TOB1P50616 345 aaPredicted RBP7.19□□□□□ -1.26
CNOT1-216ENST00000569240 NTRK3Q16288 839 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 UBE2SQ16763 222 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 FAM131AQ6UXB0 335 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 GET4Q7L5D6 327 aaPredicted RBP7.19□□□□□ -1.26
CNOT1-216ENST00000569240 FASTKD5Q7L8L6 764 aaKnown RBP7.19□□□□□ -1.26
CNOT1-216ENST00000569240 PLCZ1Q86YW0 608 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 CHERPQ8IWX8 916 aaKnown RBP7.19□□□□□ -1.26
CNOT1-216ENST00000569240 SETD6Q8TBK2 473 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 SLC35C1Q96A29 364 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 LBHD1Q9BQE6 289 aaPredicted RBP7.19□□□□□ -1.26
CNOT1-216ENST00000569240 KCNN2Q9H2S1 579 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 IL1RL2Q9HB29 575 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 RAB23Q9ULC3 237 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 SLC4A1P02730 911 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 SHBGP04278 402 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 PGDP52209 483 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 AP2S1P53680 142 aaPredicted RBP7.19□□□□□ -1.26
CNOT1-216ENST00000569240 PRKCQQ04759 706 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 CABLES1Q8TDN4 633 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 NSUN6Q8TEA1 469 aaKnown RBP7.19□□□□□ -1.26
CNOT1-216ENST00000569240 TSPEARQ8WU66 669 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 CPA5Q8WXQ8 436 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 ZNF285Q96NJ3 590 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 ISCA1Q9BUE6 129 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 SHCBP1LQ9BZQ2 653 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 CCRL2O00421 344 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 DYNC1LI2O43237 492 aaPredicted RBP7.19□□□□□ -1.26
CNOT1-216ENST00000569240 CHP2O43745 196 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 ATP6V0D1P61421 351 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 TROAPQ12815 778 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 DPYSL3Q14195 570 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 ZNF517Q6ZMY9 492 aaPredicted RBP7.19□□□□□ -1.26
CNOT1-216ENST00000569240 CLYBLQ8N0X4 340 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 UQCC2Q9BRT2 126 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 NMUR2Q9GZQ4 415 aa7.19□□□□□ -1.26
CNOT1-216ENST00000569240 CCNFP41002 786 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 GABARAPL2P60520 117 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 KRT33BQ14525 404 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 PAOXQ6QHF9 649 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 PAMR1Q6UXH9 720 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 KCTD8Q6ZWB6 473 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 GATAD2AQ86YP4 633 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 NKAPQ8N5F7 415 aaKnown RBP7.18□□□□□ -1.26
CNOT1-216ENST00000569240 URGCPQ8TCY9 931 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 PTCD2Q8WV60 388 aaKnown RBP7.18□□□□□ -1.26
CNOT1-216ENST00000569240 EFCAB6Q5THR3 1501 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 DISP1Q96F81 1524 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 SYNJ2BP-COX16A0A087WUM0 186 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 GPR75-ASB3A0A0A6YYF3 556 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 PCP4L1A6NKN8 68 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 C2orf74A8MZ97 194 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 PEX14O75381 377 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 ZNF682O95780 498 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 TPSB2P20231 275 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 ACADLP28330 430 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 MAPKAPK2P49137 400 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 S100A12P80511 92 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 CYP4F8P98187 520 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 RELAQ04206 551 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 NFE2L1Q14494 772 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 TPSAB1Q15661 275 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 SH3D19Q5HYK7 790 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 WDR45BQ5MNZ6 344 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 STYK1Q6J9G0 422 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 GPAT2Q6NUI2 795 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 FBXO42Q6P3S6 717 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 SLFN11Q7Z7L1 901 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 NT5DC4Q86YG4 428 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 SEPT12Q8IYM1 358 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 STK40Q8N2I9 435 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 OR5T2Q8NGG2 359 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 SEPHS2Q99611 448 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 SIK2Q9H0K1 926 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 COX16Q9P0S2 106 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 VANGL2Q9ULK5 521 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 ASB3Q9Y575 518 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 CRYZL1O95825 349 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 S100A2P29034 98 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 RAB5BP61020 215 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 NFIAQ12857 509 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 SLC5A5Q92911 643 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 CPXM1Q96SM3 734 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 ZNF717Q9BY31 904 aaPredicted RBP7.18□□□□□ -1.26
CNOT1-216ENST00000569240 NPAP1Q9NZP6 1156 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 SLAIN2Q9P270 581 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 NEURL4Q96JN8 1562 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 CEMIPQ8WUJ3 1361 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 PRR5-ARHGAP8B1AHC4 643 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 RASA1P20936 1047 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 EEFSECP57772 596 aaKnown RBP7.18□□□□□ -1.26
CNOT1-216ENST00000569240 ARHGAP8P85298 464 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 BMT2Q1RMZ1 405 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms