RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 CNTN6Q9UQ52 1028 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 FADS3Q9Y5Q0 445 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 HS3ST4Q9Y661 456 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 LMO7DNF2Z398 122 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 K7ERQ8 282 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 RNF103O00237 685 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 NTN3O00634 580 aaPredicted RBP12.73□□□□□ -0.37
SNX29-207ENST00000568949 PLD2O14939 933 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 P4HA2O15460 535 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 SPINT1O43278 529 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 SMAD6O43541 496 aaKnown RBP12.73□□□□□ -0.37
SNX29-207ENST00000568949 AP1G1O43747 822 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 NOBOXO60393 691 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 SNAP91O60641 907 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 AFPP02771 609 aaKnown RBP12.73□□□□□ -0.37
SNX29-207ENST00000568949 RHOCP08134 193 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 ADRB3P13945 408 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 RRM1P23921 792 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 ITGB7P26010 798 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 SLC5A2P31639 672 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 PRCPP42785 496 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 PFN3P60673 137 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 CETN1Q12798 172 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 EIF2B5Q13144 721 aaKnown RBP12.73□□□□□ -0.37
SNX29-207ENST00000568949 COBLL1Q53SF7 1204 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 ANKRD40Q6AI12 368 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 C22orf39Q6P5X5 142 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 C14orf80Q86SX3 495 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 SLC35F3Q8IY50 421 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 DEFB106AQ8N104 65 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 FBXO39Q8N4B4 442 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 DCAF4L2Q8NA75 395 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 DENND6BQ8NEG7 585 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 LMO3Q8TAP4 145 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 GRIN3AQ8TCU5 1115 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 EXTL1Q92935 676 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 SLC2A13Q96QE2 648 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 KLF6Q99612 283 aaPredicted RBP12.73□□□□□ -0.37
SNX29-207ENST00000568949 C1QTNF2Q9BXJ5 285 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 WASF2Q9Y6W5 498 aa12.73□□□□□ -0.37
SNX29-207ENST00000568949 MED7O43513 233 aa12.72□□□□□ -0.37
SNX29-207ENST00000568949 LEFTY1O75610 366 aa12.72□□□□□ -0.37
SNX29-207ENST00000568949 ANXA6P08133 673 aa12.72□□□□□ -0.37
SNX29-207ENST00000568949 L1CAMP32004 1257 aa12.72□□□□□ -0.37
SNX29-207ENST00000568949 NFKB2Q00653 900 aa12.72□□□□□ -0.37
SNX29-207ENST00000568949 LRRC63Q05C16 580 aa12.72□□□□□ -0.37
SNX29-207ENST00000568949 SGCGQ13326 291 aa12.72□□□□□ -0.37
SNX29-207ENST00000568949 PTK2BQ14289 1009 aa12.72□□□□□ -0.37
SNX29-207ENST00000568949 DRAP1Q14919 205 aaPredicted RBP12.72□□□□□ -0.37
SNX29-207ENST00000568949 TAF5Q15542 800 aa12.72□□□□□ -0.37
SNX29-207ENST00000568949 TPRG1LQ5T0D9 272 aa12.72□□□□□ -0.37
SNX29-207ENST00000568949 DPY19L3Q6ZPD9 716 aa12.72□□□□□ -0.37
SNX29-207ENST00000568949 RRAGAQ7L523 313 aa12.72□□□□□ -0.37
SNX29-207ENST00000568949 RAB11FIP2Q7L804 512 aa12.72□□□□□ -0.37
SNX29-207ENST00000568949 SETD3Q86TU7 594 aaPredicted RBP12.72□□□□□ -0.37
SNX29-207ENST00000568949 SPATA32Q96LK8 384 aa12.72□□□□□ -0.37
SNX29-207ENST00000568949 CCDC3Q9BQI4 270 aa12.72□□□□□ -0.37
SNX29-207ENST00000568949 ASNSD1Q9NWL6 643 aa12.72□□□□□ -0.37
SNX29-207ENST00000568949 APOBEC3BQ9UH17 382 aaKnown RBP12.72□□□□□ -0.37
SNX29-207ENST00000568949 PADI4Q9UM07 663 aa12.72□□□□□ -0.37
SNX29-207ENST00000568949 UNC13CQ8NB66 2214 aa12.72□□□□□ -0.37
SNX29-207ENST00000568949 SCN8AQ9UQD0 1980 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 SYNJ2BP-COX16A0A087WUM0 186 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 NVLO15381 856 aaKnown RBP12.71□□□□□ -0.37
SNX29-207ENST00000568949 TSPAN6O43657 245 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 HSF2BPO75031 334 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 PAGE1O75459 146 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 GCATO75600 419 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 CNTN5O94779 1100 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 FAM87AP0C7U9 286 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 LIPCP11150 499 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 UGT1A5P35504 534 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 PMS1P54277 932 aaKnown RBP12.71□□□□□ -0.37
SNX29-207ENST00000568949 ADKP55263 362 aaKnown RBP12.71□□□□□ -0.37
SNX29-207ENST00000568949 PKP1Q13835 747 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 TGIF1Q15583 401 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 PRRT3Q5FWE3 981 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 EFHC1Q5JVL4 640 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 ESRP1Q6NXG1 681 aaKnown RBP12.71□□□□□ -0.37
SNX29-207ENST00000568949 JAMLQ86YT9 394 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 ARHGEF19Q8IW93 802 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 PHACTR4Q8IZ21 702 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 RBFAQ8N0V3 343 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 ZNF606Q8WXB4 792 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 RAB7BQ96AH8 199 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 CCDC34Q96HJ3 373 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 HEPHQ9BQS7 1158 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 CEP44Q9C0F1 390 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 STRADBQ9C0K7 418 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 TNKS2Q9H2K2 1166 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 SYNDIG1Q9H7V2 258 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 WDR70Q9NW82 654 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 RMND1Q9NWS8 449 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 COX16Q9P0S2 106 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 SEPT10Q9P0V9 454 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 ANKMY1Q9P2S6 941 aa12.71□□□□□ -0.37
SNX29-207ENST00000568949 LRRK2Q5S007 2527 aa12.7□□□□□ -0.38
SNX29-207ENST00000568949 A0A1W2PQ27 194 aa12.7□□□□□ -0.38
SNX29-207ENST00000568949 A0A1W2PQ64 194 aa12.7□□□□□ -0.38
SNX29-207ENST00000568949 IGLON5A6NGN9 336 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms