RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 KLF6Q99612 283 aaPredicted RBP15.17■□□□□ 0.02
USB1-214ENST00000568848 SPON2Q9BUD6 331 aa15.17■□□□□ 0.02
USB1-214ENST00000568848 SLC17A9Q9BYT1 436 aa15.17■□□□□ 0.02
USB1-214ENST00000568848 TM6SF2Q9BZW4 377 aa15.17■□□□□ 0.02
USB1-214ENST00000568848 TKTL2Q9H0I9 626 aa15.17■□□□□ 0.02
USB1-214ENST00000568848 CLMPQ9H6B4 373 aa15.17■□□□□ 0.02
USB1-214ENST00000568848 DYRK4Q9NR20 520 aa15.17■□□□□ 0.02
USB1-214ENST00000568848 THSD1Q9NS62 852 aa15.17■□□□□ 0.02
USB1-214ENST00000568848 GPR27Q9NS67 375 aa15.17■□□□□ 0.02
USB1-214ENST00000568848 RMND1Q9NWS8 449 aa15.17■□□□□ 0.02
USB1-214ENST00000568848 SLC12A6Q9UHW9 1150 aa15.17■□□□□ 0.02
USB1-214ENST00000568848 RABGEF1Q9UJ41 708 aa15.17■□□□□ 0.02
USB1-214ENST00000568848 TPX2Q9ULW0 747 aaKnown RBP15.17■□□□□ 0.02
USB1-214ENST00000568848 TBC1D30Q9Y2I9 924 aa15.17■□□□□ 0.02
USB1-214ENST00000568848 PPP1R3GB7ZBB8 358 aa15.16■□□□□ 0.02
USB1-214ENST00000568848 TNFSF15O95150 251 aa15.16■□□□□ 0.02
USB1-214ENST00000568848 CSF2P04141 144 aa15.16■□□□□ 0.02
USB1-214ENST00000568848 ADRB3P13945 408 aa15.16■□□□□ 0.02
USB1-214ENST00000568848 NME1P15531 152 aaKnown RBP15.16■□□□□ 0.02
USB1-214ENST00000568848 JUNDP17535 347 aa15.16■□□□□ 0.02
USB1-214ENST00000568848 SLC9A1P19634 815 aa15.16■□□□□ 0.02
USB1-214ENST00000568848 RBMS1P29558 406 aaKnown RBP15.16■□□□□ 0.02
USB1-214ENST00000568848 NUDT1P36639 197 aa15.16■□□□□ 0.02
USB1-214ENST00000568848 ERVPABLB-1P60509 514 aa15.16■□□□□ 0.02
USB1-214ENST00000568848 SKOR1P84550 965 aa15.16■□□□□ 0.02
USB1-214ENST00000568848 PTPN20Q4JDL3 420 aa15.16■□□□□ 0.02
USB1-214ENST00000568848 COBLL1Q53SF7 1204 aa15.16■□□□□ 0.02
USB1-214ENST00000568848 TRIM59Q8IWR1 403 aa15.16■□□□□ 0.02
USB1-214ENST00000568848 SLC35F3Q8IY50 421 aa15.16■□□□□ 0.02
USB1-214ENST00000568848 STK32AQ8WU08 396 aa15.16■□□□□ 0.02
USB1-214ENST00000568848 SLC46A1Q96NT5 459 aa15.16■□□□□ 0.02
USB1-214ENST00000568848 MED15Q96RN5 788 aa15.16■□□□□ 0.02
USB1-214ENST00000568848 FADS3Q9Y5Q0 445 aa15.16■□□□□ 0.02
USB1-214ENST00000568848 SPTY2D1-AS1A0A0U1RR47 76 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 K7ENP7 123 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 PSMA7O14818 248 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 AQP9O43315 295 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 CLDN11O75508 207 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 DAB1O75553 588 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 GP1BAP07359 652 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 SULT1E1P49888 294 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 VASPP50552 380 aaPredicted RBP15.15■□□□□ 0.02
USB1-214ENST00000568848 ADKP55263 362 aaKnown RBP15.15■□□□□ 0.02
USB1-214ENST00000568848 CDH4P55283 916 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 ARF5P84085 180 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 KCTD16Q68DU8 428 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 TRNP1Q6NT89 227 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 INO80CQ6PI98 192 aaPredicted RBP15.15■□□□□ 0.02
USB1-214ENST00000568848 KYAT3Q6YP21 454 aaKnown RBP15.15■□□□□ 0.02
USB1-214ENST00000568848 PARGQ86W56 976 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 SFTPA2Q8IWL1 248 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 TMIEQ8NEW7 156 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 SPATA20Q8TB22 786 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 VOPP1Q96AW1 172 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 MED8Q96G25 268 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 CEP63Q96MT8 703 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 GSDMAQ96QA5 445 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 TBCBQ99426 244 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 HDAC8Q9BY41 377 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 MAGEB5Q9BZ81 275 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 FOXP3Q9BZS1 431 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 CLPBQ9H078 707 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 ZDHHC6Q9H6R6 413 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 SIRPGQ9P1W8 387 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 IPO11Q9UI26 975 aaKnown RBP15.15■□□□□ 0.02
USB1-214ENST00000568848 SSUH2Q9Y2M2 353 aa15.15■□□□□ 0.02
USB1-214ENST00000568848 DOPEY2Q9Y3R5 2298 aa15.14■□□□□ 0.01
USB1-214ENST00000568848 CDRT15L2A8MXV6 281 aa15.14■□□□□ 0.01
USB1-214ENST00000568848 PMM2O15305 246 aa15.14■□□□□ 0.01
USB1-214ENST00000568848 MED7O43513 233 aa15.14■□□□□ 0.01
USB1-214ENST00000568848 HSF2BPO75031 334 aa15.14■□□□□ 0.01
USB1-214ENST00000568848 SRGAP2O75044 1071 aa15.14■□□□□ 0.01
USB1-214ENST00000568848 ZMPSTE24O75844 475 aa15.14■□□□□ 0.01
USB1-214ENST00000568848 WISP1O95388 367 aa15.14■□□□□ 0.01
USB1-214ENST00000568848 AFPP02771 609 aaKnown RBP15.14■□□□□ 0.01
USB1-214ENST00000568848 IGFALSP35858 605 aa15.14■□□□□ 0.01
USB1-214ENST00000568848 ACVRL1P37023 503 aa15.14■□□□□ 0.01
USB1-214ENST00000568848 CCNHP51946 323 aaPredicted RBP15.14■□□□□ 0.01
USB1-214ENST00000568848 NEK3P51956 506 aa15.14■□□□□ 0.01
USB1-214ENST00000568848 UCNP55089 124 aa15.14■□□□□ 0.01
USB1-214ENST00000568848 HNRNPKP61978 463 aaKnown RBP eCLIP15.14■□□□□ 0.01
USB1-214ENST00000568848 KCNC4Q03721 635 aa15.14■□□□□ 0.01
USB1-214ENST00000568848 NR0B2Q15466 257 aa15.14■□□□□ 0.01
USB1-214ENST00000568848 LINC00303Q3SY05 128 aa15.14■□□□□ 0.01
USB1-214ENST00000568848 C5orf22Q49AR2 442 aa15.14■□□□□ 0.01
USB1-214ENST00000568848 C6orf132Q5T0Z8 1188 aa15.14■□□□□ 0.01
USB1-214ENST00000568848 ZCCHC8Q6NZY4 707 aaKnown RBP15.14■□□□□ 0.01
USB1-214ENST00000568848 CCDC81Q6ZN84 652 aa15.14■□□□□ 0.01
USB1-214ENST00000568848 RBM44Q6ZP01 1051 aaKnown RBP15.14■□□□□ 0.01
USB1-214ENST00000568848 LSMEM2Q8N112 164 aa15.14■□□□□ 0.01
USB1-214ENST00000568848 LRRC61Q9BV99 259 aa15.14■□□□□ 0.01
USB1-214ENST00000568848 NDFIP2Q9NV92 336 aa15.14■□□□□ 0.01
USB1-214ENST00000568848 DOCK4Q8N1I0 1966 aa15.14■□□□□ 0.01
USB1-214ENST00000568848 NEMP2A6NFY4 417 aa15.13■□□□□ 0.01
USB1-214ENST00000568848 SMC2O95347 1197 aa15.13■□□□□ 0.01
USB1-214ENST00000568848 CD160O95971 181 aa15.13■□□□□ 0.01
USB1-214ENST00000568848 PRNPP04156 253 aa15.13■□□□□ 0.01
USB1-214ENST00000568848 SLC2A3P11169 496 aa15.13■□□□□ 0.01
USB1-214ENST00000568848 WT1P19544 449 aaPredicted RBP15.13■□□□□ 0.01
USB1-214ENST00000568848 OXCT1P55809 520 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms