RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 ROR1Q01973 937 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 RHDQ02161 417 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 NSUN2Q08J23 767 aaKnown RBP eCLIP5.53□□□□□ -1.52
LINC01541-202ENST00000568095 MTM1Q13496 603 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 CYTH1Q15438 398 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 TPSAB1Q15661 275 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 LSM12Q3MHD2 195 aaKnown RBP5.53□□□□□ -1.52
LINC01541-202ENST00000568095 XKR3Q5GH77 459 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 WDR44Q5JSH3 913 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 MROH9Q5TGP6 573 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 OGFOD2Q6N063 350 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 SWSAP1Q6NVH7 229 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 FAM117BQ6P1L5 589 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 TRMT10BQ6PF06 316 aaKnown RBP5.53□□□□□ -1.52
LINC01541-202ENST00000568095 C4orf22Q6V702 233 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 CNTD1Q8N815 330 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 SLC4A11Q8NBS3 891 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 PDPRQ8NCN5 879 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 TNIP2Q8NFZ5 429 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 CXorf38Q8TB03 319 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 CASP10Q92851 521 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 COPS5Q92905 334 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 ATP6V0A1Q93050 837 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 ACDQ96AP0 544 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 SLC29A1Q99808 456 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 CTRCQ99895 268 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 SLC4A5Q9BY07 1137 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 SHCBP1LQ9BZQ2 653 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 CCDC68Q9H2F9 335 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 TPK1Q9H3S4 243 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.53□□□□□ -1.52
LINC01541-202ENST00000568095 RBAKQ9NYW8 714 aaPredicted RBP5.53□□□□□ -1.52
LINC01541-202ENST00000568095 HACD3Q9P035 362 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 DOLKQ9UPQ8 538 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 AP4S1Q9Y587 144 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 SNX9Q9Y5X1 595 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 PTPRJQ12913 1337 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 CNTNAP2Q9UHC6 1331 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 TRIP11Q15643 1979 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 TRIM38O00635 465 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 MCF2LO15068 1137 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 DYNC1LI2O43237 492 aaPredicted RBP5.53□□□□□ -1.52
LINC01541-202ENST00000568095 MAFO75444 373 aaPredicted RBP5.53□□□□□ -1.52
LINC01541-202ENST00000568095 CPNE6O95741 557 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 RALBP11234 206 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 PABPC1P11940 636 aaKnown RBP5.53□□□□□ -1.52
LINC01541-202ENST00000568095 JUNBP17275 347 aaPredicted RBP5.53□□□□□ -1.52
LINC01541-202ENST00000568095 SMPD1P17405 629 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 NCF2P19878 526 aaPredicted RBP5.53□□□□□ -1.52
LINC01541-202ENST00000568095 SLC7A1P30825 629 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 TCF7P36402 384 aaPredicted RBP5.53□□□□□ -1.52
LINC01541-202ENST00000568095 TMED10P49755 219 aaKnown RBP5.53□□□□□ -1.52
LINC01541-202ENST00000568095 NUDT2P50583 147 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 ESRRGP62508 458 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 ADAM17P78536 824 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 SREBF2Q12772 1141 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 PHKG1Q16816 387 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 RGS21Q2M5E4 152 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 C4orf46Q504U0 113 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 INTS11Q5TA45 600 aaKnown RBP5.53□□□□□ -1.52
LINC01541-202ENST00000568095 C8orf82Q6P1X6 216 aaPredicted RBP5.53□□□□□ -1.52
LINC01541-202ENST00000568095 DARS2Q6PI48 645 aaKnown RBP5.53□□□□□ -1.52
LINC01541-202ENST00000568095 TMEM270Q6UE05 265 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 CTAGE3PQ8IX95 158 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 CPNE9Q8IYJ1 553 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 MINDY2Q8NBR6 621 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 HLA-CQ95604 372 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 FAF2Q96CS3 445 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 DHRS1Q96LJ7 313 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 OR52B2Q96RD2 323 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 TMEM79Q9BSE2 394 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 CAAP1Q9H8G2 361 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 RSAD1Q9HA92 442 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 ZNF302Q9NR11 478 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 TRNAU1APQ9NX07 287 aaKnown RBP5.53□□□□□ -1.52
LINC01541-202ENST00000568095 CPA4Q9UI42 421 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 PCDHB4Q9Y5E5 795 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 CORINQ9Y5Q5 1042 aa5.53□□□□□ -1.52
LINC01541-202ENST00000568095 KRBA1A5PL33 1030 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 TCAF2A6NFQ2 919 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 G3V2L1 256 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 XPO1O14980 1071 aaKnown RBP5.52□□□□□ -1.53
LINC01541-202ENST00000568095 XPOTO43592 962 aaKnown RBP5.52□□□□□ -1.53
LINC01541-202ENST00000568095 H2AFYO75367 372 aaKnown RBP5.52□□□□□ -1.53
LINC01541-202ENST00000568095 DGAT1O75907 488 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 TRUB2O95900 331 aaKnown RBP5.52□□□□□ -1.53
LINC01541-202ENST00000568095 P4HA1P13674 534 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 GRM5P41594 1212 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 GCGRP47871 477 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 TMBIM6P55061 237 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 ATP6V0D1P61421 351 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 DYNLT1P63172 113 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 PMS2P3Q13401 168 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 TRPC3Q13507 836 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 RAB39AQ14964 217 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 SLC36A3Q495N2 470 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 DUSP28Q4G0W2 176 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 FAM47CQ5HY64 1035 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 FGD3Q5JSP0 725 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 AARS2Q5JTZ9 985 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms