RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 FAM47DPA6NHR8 397 aa11.91□□□□□ -0.5
BBS4-213ENST00000567279 TRIM49D1C9J1S8 452 aa11.91□□□□□ -0.5
BBS4-213ENST00000567279 H0Y626 953 aa11.91□□□□□ -0.5
BBS4-213ENST00000567279 CLASP2O75122 1294 aaKnown RBP11.91□□□□□ -0.5
BBS4-213ENST00000567279 USP1O94782 785 aa11.91□□□□□ -0.5
BBS4-213ENST00000567279 MT-ND3P03897 115 aa11.91□□□□□ -0.5
BBS4-213ENST00000567279 SEC24CP53992 1094 aa11.91□□□□□ -0.5
BBS4-213ENST00000567279 TNK2Q07912 1038 aa11.91□□□□□ -0.5
BBS4-213ENST00000567279 MGAT5Q09328 741 aa11.91□□□□□ -0.5
BBS4-213ENST00000567279 BMPR2Q13873 1038 aa11.91□□□□□ -0.5
BBS4-213ENST00000567279 CAMK1Q14012 370 aa11.91□□□□□ -0.5
BBS4-213ENST00000567279 POU6F1Q14863 301 aa11.91□□□□□ -0.5
BBS4-213ENST00000567279 ANKRD20A4Q4UJ75 823 aa11.91□□□□□ -0.5
BBS4-213ENST00000567279 GPR158Q5T848 1215 aa11.91□□□□□ -0.5
BBS4-213ENST00000567279 CXorf57Q6NSI4 855 aaKnown RBP11.91□□□□□ -0.5
BBS4-213ENST00000567279 BBS5Q8N3I7 341 aa11.91□□□□□ -0.5
BBS4-213ENST00000567279 SLC25A41Q8N5S1 370 aa11.91□□□□□ -0.5
BBS4-213ENST00000567279 BHMTQ93088 406 aa11.91□□□□□ -0.5
BBS4-213ENST00000567279 TCEAL4Q96EI5 215 aa11.91□□□□□ -0.5
BBS4-213ENST00000567279 CERS2Q96G23 380 aa11.91□□□□□ -0.5
BBS4-213ENST00000567279 DOCK6Q96HP0 2047 aa11.91□□□□□ -0.5
BBS4-213ENST00000567279 TGS1Q96RS0 853 aaKnown RBP11.91□□□□□ -0.5
BBS4-213ENST00000567279 KLF6Q99612 283 aaPredicted RBP11.91□□□□□ -0.5
BBS4-213ENST00000567279 CINPQ9BW66 212 aaPredicted RBP11.91□□□□□ -0.5
BBS4-213ENST00000567279 POLR1EQ9GZS1 481 aaKnown RBP11.91□□□□□ -0.5
BBS4-213ENST00000567279 SMG9Q9H0W8 520 aaKnown RBP11.91□□□□□ -0.5
BBS4-213ENST00000567279 ZNF180Q9UJW8 692 aa11.91□□□□□ -0.5
BBS4-213ENST00000567279 SOX13Q9UN79 622 aa11.91□□□□□ -0.5
BBS4-213ENST00000567279 SMG5Q9UPR3 1016 aaKnown RBP11.91□□□□□ -0.5
BBS4-213ENST00000567279 ACTL7AQ9Y615 435 aa11.91□□□□□ -0.5
BBS4-213ENST00000567279 ATG2AQ2TAZ0 1938 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 FAM237BA0A1B0GVD1 139 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 GOLGA8RI6L899 631 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 CBX4O00257 560 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 MUSKO15146 869 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 PRPF4O43172 522 aaKnown RBP eCLIP11.9□□□□□ -0.5
BBS4-213ENST00000567279 KDELR3O43731 214 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 KRT37O76014 449 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 C1RP00736 705 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 MMP2P08253 660 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 SNRPAP09012 282 aaKnown RBP11.9□□□□□ -0.5
BBS4-213ENST00000567279 ERVK-10P10266 1014 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 PTPN2P17706 415 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 KRT4P19013 534 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 CHRNA4P43681 627 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 GPM6BQ13491 265 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 NAB1Q13506 487 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 SEPT6Q14141 434 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 TEAD2Q15562 447 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 DENND5AQ6IQ26 1287 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 CYS1Q717R9 158 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 BBS7Q8IWZ6 715 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 PPHLN1Q8NEY8 458 aaKnown RBP11.9□□□□□ -0.5
BBS4-213ENST00000567279 GDAP1Q8TB36 358 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 BCAS4Q8TDM0 211 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 TMA16Q96EY4 203 aaKnown RBP11.9□□□□□ -0.5
BBS4-213ENST00000567279 SEMA3CQ99985 751 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 SLC46A2Q9BY10 475 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 FAM107BQ9H098 131 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 CHRAC1Q9NRG0 131 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 VPS45Q9NRW7 570 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 ZFATQ9P243 1243 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 TBC1D30Q9Y2I9 924 aa11.9□□□□□ -0.5
BBS4-213ENST00000567279 MAGEB16A2A368 324 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 SRRM3A6NNA2 597 aaPredicted RBP11.89□□□□□ -0.51
BBS4-213ENST00000567279 LEFTY2O00292 366 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 PER2O15055 1255 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 XYLBO75191 536 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 GJB3O75712 270 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 KRT38O76015 456 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 LUC7L3O95232 432 aaKnown RBP11.89□□□□□ -0.51
BBS4-213ENST00000567279 FGF19O95750 216 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 RHOP08100 348 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 CA4P22748 312 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 NMBRP28336 390 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 MAGEA10P43363 369 aaPredicted RBP11.89□□□□□ -0.51
BBS4-213ENST00000567279 SERPINB9P50453 376 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 EPHA5P54756 1037 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 CDH18Q13634 790 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 SHHQ15465 462 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 ARHGAP15Q53QZ3 475 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 PCID2Q5JVF3 399 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 LGSNQ5TDP6 509 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 ZNF697Q5TEC3 545 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 HTR3DQ70Z44 454 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 RTL10Q7L3V2 364 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 TMEM135Q86UB9 458 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 FAM217AQ8IXS0 508 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 TDRD5Q8NAT2 981 aaKnown RBP11.89□□□□□ -0.51
BBS4-213ENST00000567279 ARRDC2Q8TBH0 407 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 MFSD3Q96ES6 412 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 SERAC1Q96JX3 654 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 SAMD11Q96NU1 681 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 PAIP2Q9BPZ3 127 aaKnown RBP11.89□□□□□ -0.51
BBS4-213ENST00000567279 CERS4Q9HA82 394 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 HAUS2Q9NVX0 235 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 DNMT3BQ9UBC3 853 aaKnown RBP11.89□□□□□ -0.51
BBS4-213ENST00000567279 SEPT3Q9UH03 358 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 ZNF510Q9Y2H8 683 aa11.89□□□□□ -0.51
BBS4-213ENST00000567279 ZCWPW2A0A1B0GU75 182 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms