RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 CPNE1Q99829 537 aa23.64■■□□□ 1.38
LINC00543-201ENST00000567234 LRCH1Q9Y2L9 728 aa23.64■■□□□ 1.38
LINC00543-201ENST00000567234 DPPA5A6NC42 116 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 KIAA0355O15063 1070 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 TLR5O60602 858 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 UPP2O95045 317 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 BMPR2Q13873 1038 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 HNRNPDQ14103 355 aaKnown RBP23.63■■□□□ 1.37
LINC00543-201ENST00000567234 STXBP5Q5T5C0 1151 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 GRTP1Q5TC63 336 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 GIPC2Q8TF65 315 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 ZNF669Q96BR6 464 aaPredicted RBP23.63■■□□□ 1.37
LINC00543-201ENST00000567234 FAM111AQ96PZ2 611 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 RETREG1Q9H6L5 497 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 MANSC1Q9H8J5 431 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 RBM22Q9NW64 420 aaKnown RBP eCLIP23.63■■□□□ 1.37
LINC00543-201ENST00000567234 AFF4Q9UHB7 1163 aaKnown RBP23.63■■□□□ 1.37
LINC00543-201ENST00000567234 LNPEPQ9UIQ6 1025 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 COL4A6Q14031 1691 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 ZCWPW2A0A1B0GU75 182 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 CARNS1A5YM72 827 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 RAG1P15918 1043 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 OR1D2P34982 312 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 GP5P40197 560 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 OCRLQ01968 901 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 FBXL22Q6P050 247 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 RASSF3Q86WH2 238 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 DRAXINQ8NBI3 349 aaPredicted RBP23.63■■□□□ 1.37
LINC00543-201ENST00000567234 DNAJC9Q8WXX5 260 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 SPOCK2Q92563 424 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 ITFG2Q969R8 447 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 TBL1YQ9BQ87 522 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 VN1R3Q9BXE9 311 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 ENTPD7Q9NQZ7 604 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 TXNDC16Q9P2K2 825 aa23.63■■□□□ 1.37
LINC00543-201ENST00000567234 ADAM12O43184 909 aa23.62■■□□□ 1.37
LINC00543-201ENST00000567234 RENBPP51606 427 aa23.62■■□□□ 1.37
LINC00543-201ENST00000567234 CERCAMQ5T4B2 595 aa23.62■■□□□ 1.37
LINC00543-201ENST00000567234 TPGS2Q68CL5 300 aa23.62■■□□□ 1.37
LINC00543-201ENST00000567234 KIAA1841Q6NSI8 718 aa23.62■■□□□ 1.37
LINC00543-201ENST00000567234 TRIM42Q8IWZ5 723 aa23.62■■□□□ 1.37
LINC00543-201ENST00000567234 UTP4Q969X6 686 aaKnown RBP23.62■■□□□ 1.37
LINC00543-201ENST00000567234 KIFC1Q9BW19 673 aa23.62■■□□□ 1.37
LINC00543-201ENST00000567234 SLCO1B3Q9NPD5 702 aa23.62■■□□□ 1.37
LINC00543-201ENST00000567234 ABHD14A-ACY1A0A1B0GW23 586 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 A8MUI8 341 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 KLF11O14901 512 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 IL1BP01584 269 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 SOD2P04179 222 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 HLA-DQB2P05538 268 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 TNK2Q07912 1038 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 KLHDC10Q6PID8 442 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 TOP1MTQ969P6 601 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 ZNF419Q96HQ0 510 aaPredicted RBP23.61■■□□□ 1.37
LINC00543-201ENST00000567234 RMDN2Q96LZ7 410 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 LRRC37BQ96QE4 947 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 CCSER2Q9H7U1 834 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 UBP1Q9NZI7 540 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 ZNF212Q9UDV6 495 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 DNMT3LQ9UJW3 386 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 ATP9BO43861 1147 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 PEX11BO96011 259 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 ERVK-10P10266 1014 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 ACRP10323 421 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 ADRA1AP35348 466 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 ATP5C1P36542 298 aaKnown RBP23.61■■□□□ 1.37
LINC00543-201ENST00000567234 SERPINB4P48594 390 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 MAPKAPK2P49137 400 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 C5orf22Q49AR2 442 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 ALFQ53S48 1182 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 RAP1GAP2Q684P5 730 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 CDHR3Q6ZTQ4 885 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 NDUFAF2Q8N183 169 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 SPATA22Q8NHS9 363 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 ZNF461Q8TAF7 563 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 PTCD2Q8WV60 388 aaKnown RBP23.61■■□□□ 1.37
LINC00543-201ENST00000567234 ZNF689Q96CS4 500 aaPredicted RBP23.61■■□□□ 1.37
LINC00543-201ENST00000567234 NUDCD1Q96RS6 583 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 SLC25A51Q9H1U9 297 aa23.61■■□□□ 1.37
LINC00543-201ENST00000567234 C12orf65Q9H3J6 166 aaKnown RBP23.61■■□□□ 1.37
LINC00543-201ENST00000567234 CHD5Q8TDI0 1954 aa23.6■■□□□ 1.37
LINC00543-201ENST00000567234 ABLIM3O94929 683 aa23.6■■□□□ 1.37
LINC00543-201ENST00000567234 ITGA2BP08514 1039 aa23.6■■□□□ 1.37
LINC00543-201ENST00000567234 YBEYP58557 167 aaPredicted RBP23.6■■□□□ 1.37
LINC00543-201ENST00000567234 MPP3Q13368 585 aa23.6■■□□□ 1.37
LINC00543-201ENST00000567234 DBN1Q16643 649 aa23.6■■□□□ 1.37
LINC00543-201ENST00000567234 PARP15Q460N3 678 aa23.6■■□□□ 1.37
LINC00543-201ENST00000567234 PCID2Q5JVF3 399 aa23.6■■□□□ 1.37
LINC00543-201ENST00000567234 POTEHQ6S545 545 aa23.6■■□□□ 1.37
LINC00543-201ENST00000567234 CES3Q6UWW8 571 aa23.6■■□□□ 1.37
LINC00543-201ENST00000567234 TMCO2Q7Z6W1 182 aaPredicted RBP23.6■■□□□ 1.37
LINC00543-201ENST00000567234 IGSF8Q969P0 613 aa23.6■■□□□ 1.37
LINC00543-201ENST00000567234 HMCESQ96FZ2 354 aa23.6■■□□□ 1.37
LINC00543-201ENST00000567234 APOL2Q9BQE5 337 aa23.6■■□□□ 1.37
LINC00543-201ENST00000567234 CLSTN3Q9BQT9 956 aa23.6■■□□□ 1.37
LINC00543-201ENST00000567234 MAGED2Q9UNF1 606 aaPredicted RBP23.6■■□□□ 1.37
LINC00543-201ENST00000567234 MIA3Q5JRA6 1907 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 CNTN5O94779 1100 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 VHLP40337 213 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 DSG1Q02413 1049 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms