RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 GATA5Q9BWX5 397 aaPredicted RBP17.02■□□□□ 0.32
CMTM3-213ENST00000566756 PPP1R12CQ9BZL4 782 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 C20orf96Q9NUD7 363 aaPredicted RBP17.02■□□□□ 0.32
CMTM3-213ENST00000566756 COX16Q9P0S2 106 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 ZBTB14O43829 449 aa17.02■□□□□ 0.31
CMTM3-213ENST00000566756 PAPOLAP51003 745 aaKnown RBP17.02■□□□□ 0.31
CMTM3-213ENST00000566756 CLCN2P51788 898 aa17.02■□□□□ 0.31
CMTM3-213ENST00000566756 EPHB1P54762 984 aa17.02■□□□□ 0.31
CMTM3-213ENST00000566756 USP4Q13107 963 aa17.02■□□□□ 0.31
CMTM3-213ENST00000566756 PRKAA1Q13131 559 aa17.02■□□□□ 0.31
CMTM3-213ENST00000566756 UGP2Q16851 508 aa17.02■□□□□ 0.31
CMTM3-213ENST00000566756 SLC9B1Q4ZJI4 515 aa17.02■□□□□ 0.31
CMTM3-213ENST00000566756 RNF220Q5VTB9 566 aa17.02■□□□□ 0.31
CMTM3-213ENST00000566756 ARMC3Q5W041 872 aa17.02■□□□□ 0.31
CMTM3-213ENST00000566756 WSCD1Q658N2 575 aa17.02■□□□□ 0.31
CMTM3-213ENST00000566756 C16orf89Q6UX73 402 aa17.02■□□□□ 0.31
CMTM3-213ENST00000566756 MFN1Q8IWA4 741 aa17.02■□□□□ 0.31
CMTM3-213ENST00000566756 NPWQ8N729 165 aa17.02■□□□□ 0.31
CMTM3-213ENST00000566756 RP9Q8TA86 221 aaKnown RBP17.02■□□□□ 0.31
CMTM3-213ENST00000566756 PYDC1Q8WXC3 89 aa17.02■□□□□ 0.31
CMTM3-213ENST00000566756 IRGQQ8WZA9 623 aa17.02■□□□□ 0.31
CMTM3-213ENST00000566756 MFSD3Q96ES6 412 aa17.02■□□□□ 0.31
CMTM3-213ENST00000566756 PPP1R2P1Q96PQ5 205 aa17.02■□□□□ 0.31
CMTM3-213ENST00000566756 C1QTNF1Q9BXJ1 281 aa17.02■□□□□ 0.31
CMTM3-213ENST00000566756 FTHL17Q9BXU8 183 aa17.02■□□□□ 0.31
CMTM3-213ENST00000566756 UNC93B1Q9H1C4 597 aa17.02■□□□□ 0.31
CMTM3-213ENST00000566756 PAPOLBQ9NRJ5 636 aaKnown RBP17.02■□□□□ 0.31
CMTM3-213ENST00000566756 STK39Q9UEW8 545 aa17.02■□□□□ 0.31
CMTM3-213ENST00000566756 BCAP29Q9UHQ4 241 aa17.02■□□□□ 0.31
CMTM3-213ENST00000566756 RGSL1A5PLK6 1076 aa17.01■□□□□ 0.31
CMTM3-213ENST00000566756 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.01■□□□□ 0.31
CMTM3-213ENST00000566756 LTFP02788 710 aa17.01■□□□□ 0.31
CMTM3-213ENST00000566756 UQCRBP14927 111 aa17.01■□□□□ 0.31
CMTM3-213ENST00000566756 NFKB1P19838 968 aa17.01■□□□□ 0.31
CMTM3-213ENST00000566756 CYP2C18P33260 490 aa17.01■□□□□ 0.31
CMTM3-213ENST00000566756 CXCR3P49682 368 aa17.01■□□□□ 0.31
CMTM3-213ENST00000566756 RPL14P50914 215 aaKnown RBP17.01■□□□□ 0.31
CMTM3-213ENST00000566756 MAP3K7CLP57077 242 aa17.01■□□□□ 0.31
CMTM3-213ENST00000566756 FAM189BP81408 668 aa17.01■□□□□ 0.31
CMTM3-213ENST00000566756 ROR2Q01974 943 aaKnown RBP17.01■□□□□ 0.31
CMTM3-213ENST00000566756 ZBTB17Q13105 803 aa17.01■□□□□ 0.31
CMTM3-213ENST00000566756 CERCAMQ5T4B2 595 aa17.01■□□□□ 0.31
CMTM3-213ENST00000566756 DCLRE1AQ6PJP8 1040 aa17.01■□□□□ 0.31
CMTM3-213ENST00000566756 RNF111Q6ZNA4 994 aa17.01■□□□□ 0.31
CMTM3-213ENST00000566756 SLC24A5Q71RS6 500 aa17.01■□□□□ 0.31
CMTM3-213ENST00000566756 SDCCAG8Q86SQ7 713 aaPredicted RBP17.01■□□□□ 0.31
CMTM3-213ENST00000566756 CNTN4Q8IWV2 1026 aa17.01■□□□□ 0.31
CMTM3-213ENST00000566756 SCML4Q8N228 414 aa17.01■□□□□ 0.31
CMTM3-213ENST00000566756 NETO2Q8NC67 525 aa17.01■□□□□ 0.31
CMTM3-213ENST00000566756 PDCD6IPQ8WUM4 868 aaKnown RBP17.01■□□□□ 0.31
CMTM3-213ENST00000566756 UROC1Q96N76 676 aa17.01■□□□□ 0.31
CMTM3-213ENST00000566756 GBP5Q96PP8 586 aa17.01■□□□□ 0.31
CMTM3-213ENST00000566756 COLEC11Q9BWP8 271 aa17.01■□□□□ 0.31
CMTM3-213ENST00000566756 ACE2Q9BYF1 805 aaPredicted RBP17.01■□□□□ 0.31
CMTM3-213ENST00000566756 ANLNQ9NQW6 1124 aa17.01■□□□□ 0.31
CMTM3-213ENST00000566756 C6orf203Q9P0P8 240 aaPredicted RBP17.01■□□□□ 0.31
CMTM3-213ENST00000566756 TLK1Q9UKI8 766 aa17.01■□□□□ 0.31
CMTM3-213ENST00000566756 TBC1D30Q9Y2I9 924 aa17.01■□□□□ 0.31
CMTM3-213ENST00000566756 YJEFN3A6XGL0 299 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 USP12O75317 370 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 SRGAP2BP0DMP2 458 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 IRF9Q00978 393 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 SEL1L3Q68CR1 1132 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 PM20D1Q6GTS8 502 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 RTN4RL1Q86UN2 441 aaPredicted RBP17■□□□□ 0.31
CMTM3-213ENST00000566756 FAM35AQ86V20 835 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 ZC3HC1Q86WB0 502 aaKnown RBP17■□□□□ 0.31
CMTM3-213ENST00000566756 FAM126BQ8IXS8 530 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 TMEM151AQ8N4L1 468 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 ZSCAN18Q8TBC5 510 aaPredicted RBP17■□□□□ 0.31
CMTM3-213ENST00000566756 MAPK15Q8TD08 544 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 PTCD2Q8WV60 388 aaKnown RBP17■□□□□ 0.31
CMTM3-213ENST00000566756 SH3GL3Q99963 347 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 ZNF385DQ9H6B1 395 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 CRTAC1Q9NQ79 661 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 MRGBPQ9NV56 204 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 ADAMTS6Q9UKP5 1117 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 AAR2Q9Y312 384 aaKnown RBP17■□□□□ 0.31
CMTM3-213ENST00000566756 ENO4A6NNW6 628 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 I6L893 689 aaPredicted RBP17■□□□□ 0.31
CMTM3-213ENST00000566756 ATP9BO43861 1147 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 PDE5AO76074 875 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 DDHD2O94830 711 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 UPP2O95045 317 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 SELPP16109 830 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 TUSC3Q13454 348 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 MED21Q13503 144 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 BFSP2Q13515 415 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 OLIG2Q13516 323 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 SLC12A1Q13621 1099 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 GRM2Q14416 872 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 KIAA0319Q5VV43 1072 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 LRRC8DQ7L1W4 858 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 SPDYE1Q8NFV5 336 aaPredicted RBP17■□□□□ 0.31
CMTM3-213ENST00000566756 STYXQ8WUJ0 223 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 AZIN2Q96A70 460 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 SMOQ99835 787 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 BEGAINQ9BUH8 593 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 OXCT2Q9BYC2 517 aaPredicted RBP17■□□□□ 0.31
CMTM3-213ENST00000566756 IARS2Q9NSE4 1012 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms