RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 GPR27Q9NS67 375 aa15.28■□□□□ 0.04
RNF40-209ENST00000566703 EVA1BQ9NVM1 165 aa15.28■□□□□ 0.04
RNF40-209ENST00000566703 OR12D3Q9UGF7 316 aa15.28■□□□□ 0.04
RNF40-209ENST00000566703 NOCTQ9UK39 431 aaKnown RBP15.28■□□□□ 0.04
RNF40-209ENST00000566703 FADS3Q9Y5Q0 445 aa15.28■□□□□ 0.04
RNF40-209ENST00000566703 NYNRINQ9P2P1 1898 aaKnown RBP15.28■□□□□ 0.04
RNF40-209ENST00000566703 ACACAQ13085 2346 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 RIOK3O14730 519 aaKnown RBP15.27■□□□□ 0.04
RNF40-209ENST00000566703 RRP8O43159 456 aaKnown RBP15.27■□□□□ 0.04
RNF40-209ENST00000566703 TSPAN6O43657 245 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 CD160O95971 181 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 GIMD1P0DJR0 217 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 CKMT1AP12532 417 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 SDC4P31431 198 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 PTPN9P43378 593 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 ABCG1P45844 678 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 DUSP3P51452 185 aaPredicted RBP15.27■□□□□ 0.04
RNF40-209ENST00000566703 DNA2P51530 1060 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 CCNHP51946 323 aaPredicted RBP15.27■□□□□ 0.04
RNF40-209ENST00000566703 CLDN6P56747 220 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 HNRNPKP61978 463 aaKnown RBP eCLIP15.27■□□□□ 0.04
RNF40-209ENST00000566703 DAB2P98082 770 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 ATP11AP98196 1134 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 MANEALQ5VSG8 457 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 SEL1L3Q68CR1 1132 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 KYAT3Q6YP21 454 aaKnown RBP15.27■□□□□ 0.04
RNF40-209ENST00000566703 LRRC69Q6ZNQ3 347 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 DRC7Q8IY82 874 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 SNIP1Q8TAD8 396 aaKnown RBP15.27■□□□□ 0.04
RNF40-209ENST00000566703 RXFP2Q8WXD0 754 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 CENPIQ92674 756 aaPredicted RBP15.27■□□□□ 0.04
RNF40-209ENST00000566703 ARHGEF2Q92974 986 aaKnown RBP15.27■□□□□ 0.04
RNF40-209ENST00000566703 MYOCQ99972 504 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 MAGEH1Q9H213 219 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 GANQ9H2C0 597 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 FZD3Q9NPG1 666 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 METTL5Q9NRN9 209 aaKnown RBP15.27■□□□□ 0.04
RNF40-209ENST00000566703 TMEM248Q9NWD8 314 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 NLGN3Q9NZ94 848 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 HECAQ9UBI9 543 aaPredicted RBP15.27■□□□□ 0.04
RNF40-209ENST00000566703 HPCAL4Q9UM19 191 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 CSNK1G3Q9Y6M4 447 aa15.27■□□□□ 0.04
RNF40-209ENST00000566703 C2CD4BA6NLJ0 364 aa15.26■□□□□ 0.03
RNF40-209ENST00000566703 SCAMP1O15126 338 aa15.26■□□□□ 0.03
RNF40-209ENST00000566703 POP4O95707 220 aaKnown RBP15.26■□□□□ 0.03
RNF40-209ENST00000566703 PAK4O96013 591 aaPredicted RBP15.26■□□□□ 0.03
RNF40-209ENST00000566703 MT-CO3P00414 261 aa15.26■□□□□ 0.03
RNF40-209ENST00000566703 GP1BAP07359 652 aa15.26■□□□□ 0.03
RNF40-209ENST00000566703 TPM2P07951 284 aa15.26■□□□□ 0.03
RNF40-209ENST00000566703 SOX5P35711 763 aa15.26■□□□□ 0.03
RNF40-209ENST00000566703 RABIFP47224 123 aa15.26■□□□□ 0.03
RNF40-209ENST00000566703 GSCP56915 257 aaPredicted RBP15.26■□□□□ 0.03
RNF40-209ENST00000566703 CLDN2P57739 230 aa15.26■□□□□ 0.03
RNF40-209ENST00000566703 SNRPD1P62314 119 aaKnown RBP15.26■□□□□ 0.03
RNF40-209ENST00000566703 FMO1Q01740 532 aa15.26■□□□□ 0.03
RNF40-209ENST00000566703 SGCGQ13326 291 aa15.26■□□□□ 0.03
RNF40-209ENST00000566703 POLD3Q15054 466 aaPredicted RBP15.26■□□□□ 0.03
RNF40-209ENST00000566703 CCDC14Q49A88 953 aa15.26■□□□□ 0.03
RNF40-209ENST00000566703 NLRP14Q86W24 1093 aa15.26■□□□□ 0.03
RNF40-209ENST00000566703 EMC1Q8N766 993 aa15.26■□□□□ 0.03
RNF40-209ENST00000566703 BAP1Q92560 729 aa15.26■□□□□ 0.03
RNF40-209ENST00000566703 FGF11Q92914 225 aa15.26■□□□□ 0.03
RNF40-209ENST00000566703 ARHGEF26Q96DR7 871 aa15.26■□□□□ 0.03
RNF40-209ENST00000566703 C1QTNF2Q9BXJ5 285 aa15.26■□□□□ 0.03
RNF40-209ENST00000566703 UCKL1Q9NWZ5 548 aa15.26■□□□□ 0.03
RNF40-209ENST00000566703 TAB2Q9NYJ8 693 aa15.26■□□□□ 0.03
RNF40-209ENST00000566703 FCF1Q9Y324 198 aaKnown RBP15.26■□□□□ 0.03
RNF40-209ENST00000566703 APC2O95996 2303 aa15.26■□□□□ 0.03
RNF40-209ENST00000566703 ARID1BQ8NFD5 2236 aaPredicted RBP15.25■□□□□ 0.03
RNF40-209ENST00000566703 DMXL2Q8TDJ6 3036 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 SPTY2D1-AS1A0A0U1RR47 76 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 POM121BA6NF01 834 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 ZSCAN5CA6NGD5 496 aaPredicted RBP15.25■□□□□ 0.03
RNF40-209ENST00000566703 TLX3O43711 291 aaPredicted RBP15.25■□□□□ 0.03
RNF40-209ENST00000566703 GFPT2O94808 682 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 GSRP00390 522 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 CSF2P04141 144 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 CHRNB2P17787 502 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 ACTN2P35609 894 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 ACVRL1P37023 503 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 STAT1P42224 750 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 JAM2P57087 298 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 POLR2FP61218 127 aaKnown RBP15.25■□□□□ 0.03
RNF40-209ENST00000566703 SEMG2Q02383 582 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 MAPK8IP2Q13387 824 aaPredicted RBP15.25■□□□□ 0.03
RNF40-209ENST00000566703 FGL2Q14314 439 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 ZNF805Q5CZA5 627 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 FKBP15Q5T1M5 1219 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 PARS2Q7L3T8 475 aaKnown RBP15.25■□□□□ 0.03
RNF40-209ENST00000566703 SLC22A18ASQ8N1D0 253 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 DENND6BQ8NEG7 585 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 SLC20A1Q8WUM9 679 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 NTAN1Q96AB6 310 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 DCBLD2Q96PD2 775 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 OSBPL1AQ9BXW6 950 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 VPS16Q9H269 839 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 ZZEF1O43149 2961 aa15.25■□□□□ 0.03
RNF40-209ENST00000566703 TP53BP1Q12888 1972 aaPredicted RBP15.25■□□□□ 0.03
RNF40-209ENST00000566703 C16orf96A6NNT2 1141 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 H3BM21 787 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms