RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ZNF135P52742 658 aaPredicted RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 SNAP47Q5SQN1 464 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 RNF44Q7L0R7 432 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 ARMC8Q8IUR7 673 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 KATNAL2Q8IYT4 538 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 BEND7Q8N7W2 519 aaPredicted RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 RDM1Q8NG50 284 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 TBCKQ8TEA7 893 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 NKD2Q969F2 451 aaPredicted RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 SH3KBP1Q96B97 665 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 EBF4Q9BQW3 602 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 RUSC1Q9BVN2 902 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 SNX25Q9H3E2 840 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 IL17RBQ9NRM6 502 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 PNPOQ9NVS9 261 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 ING3Q9NXR8 418 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 ZNF646O15015 1829 aaPredicted RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 TCRBV3S1A0A5B6 114 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 POLR1CO15160 346 aaPredicted RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 TEX28O15482 410 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 MSCO60682 206 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 SEC14L2O76054 403 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 ITGB3P05106 788 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 CCNA2P20248 432 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 GCSHP23434 173 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 PIK3R1P27986 724 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 CAPGP40121 348 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 STAT3P40763 770 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 GABRB2P47870 512 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 MS4A2Q01362 244 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 EVX2Q03828 476 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 ZNF484Q5JVG2 852 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 HECTD3Q5T447 861 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 KLHL17Q6TDP4 642 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 TAS2R42Q7RTR8 314 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 PRSS48Q7RTY5 328 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 DEFB107AQ8IZN7 70 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 TADA1Q96BN2 335 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 COPG2Q9UBF2 871 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 SCN8AQ9UQD0 1980 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 A0A0G2JMP0 313 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 SAC3D1A6NKF1 404 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 SYCE1LA8MT33 242 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 EVPLLA8MZ36 301 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 K7ENM7 598 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 SHOXO15266 292 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 GRIN3BO60391 1043 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 TIPRLO75663 272 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 PLA2G4BP0C869 781 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 GLRA2P23416 452 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 PKLRP30613 574 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 KRT76Q01546 638 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 SLC10A2Q12908 348 aaPredicted RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 TARDBPQ13148 414 aaKnown RBP eCLIP2.95□□□□□ -1.943e-8■■■■■ 36.6
CHD9-218ENST00000566029 DGKDQ16760 1214 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 LRRC38Q5VT99 294 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 USP51Q70EK9 711 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 DNAJB7Q7Z6W7 309 aaPredicted RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 FBXO11Q86XK2 927 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 MTFMTQ96DP5 389 aaKnown RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 OSBPL11Q9BXB4 747 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 COQ10BQ9H8M1 238 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 TBC1D14Q9P2M4 693 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 ZNF804BA4D1E1 1349 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 ALOX12P18054 663 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 SELPLGQ14242 412 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 NDUFAF5Q5TEU4 345 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 CRTC1Q6UUV9 634 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 PIWIL3Q7Z3Z3 882 aaKnown RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 TRIM69Q86WT6 500 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 SPARTQ8N0X7 666 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 SLC2A14Q8TDB8 520 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 VPS33AQ96AX1 596 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 SERPINI1Q99574 410 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 TUBA1CQ9BQE3 449 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 MAGEE1Q9HCI5 957 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 KLQ9UEF7 1012 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 RPS6KA6Q9UK32 745 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 PLCL2Q9UPR0 1127 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 APOBEC2Q9Y235 224 aaKnown RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 SLC27A5Q9Y2P5 690 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 MAU2Q9Y6X3 613 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 SMAD9O15198 467 aaKnown RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 CA12O43570 354 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 SGPL1O95470 568 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 SNRPAP09012 282 aaKnown RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 NR4A1P22736 598 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 VAMP1P23763 118 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 MRPS22P82650 360 aaKnown RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 PMS2P3Q13401 168 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 GTF2IRD2BQ6EKJ0 949 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 BNC2Q6ZN30 1099 aaPredicted RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 CHSY3Q70JA7 882 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 GTF2IRD2Q86UP8 949 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 IGDCC3Q8IVU1 814 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 SNX31Q8N9S9 440 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 TMC2Q8TDI7 906 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 MARVELD3Q96A59 401 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 SH3YL1Q96HL8 342 aaPredicted RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 CDC14AQ9UNH5 594 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms