RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 NEU3Q9UQ49 428 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 FNDC3AQ9Y2H6 1198 aaKnown RBP17.05■□□□□ 0.32
USB1-211ENST00000565662 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.05■□□□□ 0.32
USB1-211ENST00000565662 SNX11Q9Y5W9 270 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 SNX10Q9Y5X0 201 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 A0A1B0GTQ1 180 aa17.04■□□□□ 0.32
USB1-211ENST00000565662 TLR4O00206 839 aa17.04■□□□□ 0.32
USB1-211ENST00000565662 GIPC1O14908 333 aa17.04■□□□□ 0.32
USB1-211ENST00000565662 CBFA2T2O43439 604 aa17.04■□□□□ 0.32
USB1-211ENST00000565662 PRPSAP2O60256 369 aa17.04■□□□□ 0.32
USB1-211ENST00000565662 LEFTY1O75610 366 aa17.04■□□□□ 0.32
USB1-211ENST00000565662 POP4O95707 220 aaKnown RBP17.04■□□□□ 0.32
USB1-211ENST00000565662 SERPING1P05155 500 aa17.04■□□□□ 0.32
USB1-211ENST00000565662 HNRNPA2B1P22626 353 aaKnown RBP17.04■□□□□ 0.32
USB1-211ENST00000565662 PCK1P35558 622 aa17.04■□□□□ 0.32
USB1-211ENST00000565662 RPL7AP62424 266 aaKnown RBP17.04■□□□□ 0.32
USB1-211ENST00000565662 RPS21P63220 83 aaKnown RBP17.04■□□□□ 0.32
USB1-211ENST00000565662 ERMARDQ5T6L9 678 aa17.04■□□□□ 0.32
USB1-211ENST00000565662 FBXL19Q6PCT2 694 aa17.04■□□□□ 0.32
USB1-211ENST00000565662 LINGO4Q6UY18 593 aa17.04■□□□□ 0.32
USB1-211ENST00000565662 HORMAD1Q86X24 394 aa17.04■□□□□ 0.32
USB1-211ENST00000565662 LZTR1Q8N653 840 aa17.04■□□□□ 0.32
USB1-211ENST00000565662 BAHD1Q8TBE0 780 aaPredicted RBP17.04■□□□□ 0.32
USB1-211ENST00000565662 RHBDD1Q8TEB9 315 aa17.04■□□□□ 0.32
USB1-211ENST00000565662 ADAMTS14Q8WXS8 1223 aa17.04■□□□□ 0.32
USB1-211ENST00000565662 ZNF653Q96CK0 615 aa17.04■□□□□ 0.32
USB1-211ENST00000565662 IFT43Q96FT9 208 aa17.04■□□□□ 0.32
USB1-211ENST00000565662 FEM1CQ96JP0 617 aa17.04■□□□□ 0.32
USB1-211ENST00000565662 ANP32EQ9BTT0 268 aa17.04■□□□□ 0.32
USB1-211ENST00000565662 CNOT8Q9UFF9 292 aaKnown RBP17.04■□□□□ 0.32
USB1-211ENST00000565662 A0A1W2PR77 199 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 ARHGAP42A6NI28 874 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 SMAD6O43541 496 aaKnown RBP17.03■□□□□ 0.32
USB1-211ENST00000565662 TNFSF14O43557 240 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 TSPAN6O43657 245 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 CREB3O43889 395 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 CBFA2T3O75081 653 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 FTLP02792 175 aaPredicted RBP17.03■□□□□ 0.32
USB1-211ENST00000565662 CTSLP07711 333 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 TPM1P09493 284 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 ADRB3P13945 408 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 RXRGP48443 463 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 NXPH1P58417 271 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 BNC1Q01954 994 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 HS1BP3Q53T59 392 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 ZNF571Q7Z3V5 609 aaPredicted RBP17.03■□□□□ 0.32
USB1-211ENST00000565662 PHLDB2Q86SQ0 1253 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 DENND6BQ8NEG7 585 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 GRIN3AQ8TCU5 1115 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 HCAR2Q8TDS4 363 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 ASB12Q8WXK4 309 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 CNTNAP3BQ96NU0 1288 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 C1QTNF7Q9BXJ2 289 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 CNTNAP3Q9BZ76 1288 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 ISCUQ9H1K1 167 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 ZWILCHQ9H900 591 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 EVA1BQ9NVM1 165 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 HECAQ9UBI9 543 aaPredicted RBP17.03■□□□□ 0.32
USB1-211ENST00000565662 LUC7L2Q9Y383 392 aaKnown RBP17.03■□□□□ 0.32
USB1-211ENST00000565662 MSRB2Q9Y3D2 182 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 WASF2Q9Y6W5 498 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 TMEM131Q92545 1883 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 ACACBO00763 2458 aa17.03■□□□□ 0.32
USB1-211ENST00000565662 FAM221BA6H8Z2 402 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 TMEM191CA6NGB0 347 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 EEF2KO00418 725 aaKnown RBP17.02■□□□□ 0.32
USB1-211ENST00000565662 TOR1BO14657 336 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 DAPK3O43293 454 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 BUB1O43683 1085 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 C1SP09871 688 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 FTH1P19P0C7X4 201 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 HCAR3P49019 387 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 DNA2P51530 1060 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 PPP2CBP62714 309 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 PPP2CAP67775 309 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 PIGHQ14442 188 aaPredicted RBP17.02■□□□□ 0.32
USB1-211ENST00000565662 RFTN1Q14699 578 aaPredicted RBP17.02■□□□□ 0.32
USB1-211ENST00000565662 ZNF805Q5CZA5 627 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 ARSIQ5FYB1 569 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 ARTNQ5T4W7 220 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 LUZP1Q86V48 1076 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 GALNT15Q8N3T1 639 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 OR2I1PQ8NGU4 316 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 NAP1L5Q96NT1 182 aaPredicted RBP17.02■□□□□ 0.32
USB1-211ENST00000565662 TNKS2Q9H2K2 1166 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 ZDHHC6Q9H6R6 413 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 ARHGAP20Q9P2F6 1191 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 FTSJ1Q9UET6 329 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 CAPN11Q9UMQ6 739 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 MFHAS1Q9Y4C4 1052 aa17.02■□□□□ 0.32
USB1-211ENST00000565662 TPRP12270 2363 aaKnown RBP17.01■□□□□ 0.31
USB1-211ENST00000565662 SPAARA0A1B0GVQ0 90 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 A6NNZ2 444 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 TMCO5BA8MYB1 307 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 FAM72CH0Y354 149 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 H0Y8X5 98 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 K7ERQ8 282 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 PCDH8O95206 1070 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 GJB6O95452 261 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 ITGAVP06756 1048 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms