RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 GMIPQ9P107 970 aa6.4□□□□□ -1.38
UBFD1-204ENST00000565634 SIRPGQ9P1W8 387 aa6.4□□□□□ -1.38
UBFD1-204ENST00000565634 NUDT5Q9UKK9 219 aa6.4□□□□□ -1.38
UBFD1-204ENST00000565634 DSEQ9UL01 958 aa6.4□□□□□ -1.38
UBFD1-204ENST00000565634 MMP17Q9ULZ9 603 aa6.4□□□□□ -1.38
UBFD1-204ENST00000565634 PPT2Q9UMR5 302 aa6.4□□□□□ -1.38
UBFD1-204ENST00000565634 NENFQ9UMX5 172 aa6.4□□□□□ -1.38
UBFD1-204ENST00000565634 CYP8B1Q9UNU6 501 aa6.4□□□□□ -1.38
UBFD1-204ENST00000565634 REXO2Q9Y3B8 237 aaKnown RBP6.4□□□□□ -1.38
UBFD1-204ENST00000565634 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.4□□□□□ -1.38
UBFD1-204ENST00000565634 ANKRD17O75179 2603 aaKnown RBP6.4□□□□□ -1.39
UBFD1-204ENST00000565634 SPTBN1Q01082 2364 aaKnown RBP6.39□□□□□ -1.39
UBFD1-204ENST00000565634 NBPF19A0A087WUL8 3843 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 LOC100289279A0A1B0GTE1 492 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 METTL12A8MUP2 240 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 GREM1O60565 184 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 PAGE1O75459 146 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 ERBB2P04626 1255 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 NTRK1P04629 796 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 CYP1A1P04798 512 aaPredicted RBP6.39□□□□□ -1.39
UBFD1-204ENST00000565634 FYNP06241 537 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 UNGP13051 313 aaPredicted RBP6.39□□□□□ -1.39
UBFD1-204ENST00000565634 LCP1P13796 627 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 DRD2P14416 443 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 TFE3P19532 575 aaPredicted RBP6.39□□□□□ -1.39
UBFD1-204ENST00000565634 TNFAIP3P21580 790 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 PAX3P23760 479 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 PCSK1P29120 753 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 OPRD1P41143 372 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 ARL4DP49703 201 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 PITX1P78337 314 aaPredicted RBP6.39□□□□□ -1.39
UBFD1-204ENST00000565634 ZXDBP98169 803 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 IL9RQ01113 521 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 TSPY1Q01534 308 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 CDR2Q01850 454 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 TLE3Q04726 772 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 KLHL30Q0D2K2 578 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 IFRD2Q12894 506 aaPredicted RBP6.39□□□□□ -1.39
UBFD1-204ENST00000565634 TARDBPQ13148 414 aaKnown RBP eCLIP6.39□□□□□ -1.39
UBFD1-204ENST00000565634 PWP1Q13610 501 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 MEA1Q16626 185 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 MGAT5BQ3V5L5 792 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 FBXO43Q4G163 708 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 PTPN20Q4JDL3 420 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 ENOSF1Q7L5Y1 443 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 PIGZQ86VD9 579 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 C11orf74Q86VG3 221 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 SPATA2LQ8IUW3 424 aaPredicted RBP6.39□□□□□ -1.39
UBFD1-204ENST00000565634 DCP1BQ8IZD4 617 aaKnown RBP6.39□□□□□ -1.39
UBFD1-204ENST00000565634 GALNT15Q8N3T1 639 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 IL17RCQ8NAC3 791 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 GOLM1Q8NBJ4 401 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 LEMD2Q8NC56 503 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 C1orf131Q8NDD1 294 aaKnown RBP6.39□□□□□ -1.39
UBFD1-204ENST00000565634 ARHGEF26Q96DR7 871 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 FAXDC2Q96IV6 333 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 NHEJ1Q9H9Q4 299 aaPredicted RBP6.39□□□□□ -1.39
UBFD1-204ENST00000565634 CSNK1G1Q9HCP0 422 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 TM7SF3Q9NS93 570 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 KRT82Q9NSB4 513 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 IL37Q9NZH6 218 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 MAGED2Q9UNF1 606 aaPredicted RBP6.39□□□□□ -1.39
UBFD1-204ENST00000565634 PCDHB5Q9Y5E4 795 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 SLCO1B1Q9Y6L6 691 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 DUSP10Q9Y6W6 482 aa6.39□□□□□ -1.39
UBFD1-204ENST00000565634 IGHV1OR15-9A0A0B4J2B8 117 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 YJEFN3A6XGL0 299 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 E5RJQ4 531 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 E7ENQ6 273 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 M0QYV0 167 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 MDM4O15151 490 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 PAPSS1O43252 624 aaPredicted RBP6.38□□□□□ -1.39
UBFD1-204ENST00000565634 TADA3O75528 432 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 GRAP2O75791 330 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 ALDH1A2O94788 518 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 FTLP02792 175 aaPredicted RBP6.38□□□□□ -1.39
UBFD1-204ENST00000565634 SERPING1P05155 500 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 FERP16591 822 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 GABRG2P18507 467 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 AVPR1AP37288 418 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 PRKCIP41743 596 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 IL12RB1P42701 662 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 GRIA4P48058 902 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 RPL34P49207 117 aaKnown RBP6.38□□□□□ -1.39
UBFD1-204ENST00000565634 KIF11P52732 1056 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 NOMO3P69849 1222 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 CCZ1BP86790 482 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 CCZ1P86791 482 aaPredicted RBP6.38□□□□□ -1.39
UBFD1-204ENST00000565634 KDSRQ06136 332 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 DNAJC3Q13217 504 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 SLC14A1Q13336 389 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 CAMK2GQ13555 558 aaPredicted RBP6.38□□□□□ -1.39
UBFD1-204ENST00000565634 SMAD1Q15797 465 aaKnown RBP6.38□□□□□ -1.39
UBFD1-204ENST00000565634 MSMPQ1L6U9 139 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 CLEC16AQ2KHT3 1053 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 GAB4Q2WGN9 574 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 HLA-BQ31612 363 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 RAB41Q5JT25 222 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 SNAP47Q5SQN1 464 aa6.38□□□□□ -1.39
UBFD1-204ENST00000565634 SYPL2Q5VXT5 272 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms