RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 CCR5P51681 352 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 CLCN6P51797 869 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 RACK1P63244 317 aaKnown RBP13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 NRG1Q02297 640 aaPredicted RBP13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 MAMLD1Q13495 774 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 POLD3Q15054 466 aaPredicted RBP13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 AGBL4Q5VU57 503 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 ZNF783Q6ZMS7 281 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 PRPF39Q86UA1 669 aaKnown RBP13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 VPS36Q86VN1 386 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 EPAS1Q99814 870 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 ACE2Q9BYF1 805 aaPredicted RBP13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 ISCUQ9H1K1 167 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 ZDHHC6Q9H6R6 413 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 ABHD10Q9NUJ1 306 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 PARVAQ9NVD7 372 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 HPCAL4Q9UM19 191 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 NEU3Q9UQ49 428 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 CA5BQ9Y2D0 317 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 CEP295Q9C0D2 2601 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 CABIN1Q9Y6J0 2220 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 A0A087X0T9 212 aa13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 GOLGA8CPA6NN73 597 aa13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 PLRG1O43660 514 aaKnown RBP13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 BUB1O43683 1085 aa13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 RNGTTO60942 597 aaKnown RBP13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 LEFTY1O75610 366 aa13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 PCDH8O95206 1070 aa13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 PRNPP04156 253 aa13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 FAM228BP0C875 321 aa13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 CD38P28907 300 aa13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 L1CAMP32004 1257 aa13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 ETFBP38117 255 aa13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 CCNHP51946 323 aaPredicted RBP13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 ADKP55263 362 aaKnown RBP13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 TPI1P60174 286 aa13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 CA9Q16790 459 aa13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 CARD16Q5EG05 197 aa13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 PIP5KL1Q5T9C9 394 aa13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 CNGA4Q8IV77 575 aa13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 HEPHQ9BQS7 1158 aa13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 MAGEH1Q9H213 219 aa13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 DHX35Q9H5Z1 703 aaKnown RBP13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 OSGEPQ9NPF4 335 aa13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 AP4E1Q9UPM8 1137 aa13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 TRPM6Q9BX84 2022 aa13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 TDRD6O60522 2096 aaKnown RBP13.89□□□□□ -0.19
VPS9D1-204ENST00000565023 UPK3BL1B0FP48 263 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 AKR1B15C9JRZ8 316 aaPredicted RBP13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 UPK3BL2E5RIL1 263 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 SLC31A1O15431 190 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 SLC7A4O43246 635 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 HYAL3O43820 417 aaPredicted RBP13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 ZNF821O75541 412 aaPredicted RBP13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 PRLRP16471 622 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 CTSKP43235 329 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 TAS2R38P59533 333 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 SLC20A2Q08357 652 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 SCAPQ12770 1279 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 SLC14A1Q13336 389 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 MAPK8IP2Q13387 824 aaPredicted RBP13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 COL9A2Q14055 689 aaPredicted RBP13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 TRIP6Q15654 476 aaKnown RBP13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 CCDC157Q569K6 752 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 ATXN7L2Q5T6C5 722 aaPredicted RBP13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 PLEKHA7Q6IQ23 1121 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 GATAD2AQ86YP4 633 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 PCDH20Q8N6Y1 951 aaKnown RBP13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 RTL3Q8N8U3 475 aaKnown RBP13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 PNPLA1Q8N8W4 532 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 TMIEQ8NEW7 156 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 RHBDD1Q8TEB9 315 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 SKA1Q96BD8 255 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 HMCESQ96FZ2 354 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 PEBP4Q96S96 227 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 SNRNP25Q9BV90 132 aaKnown RBP13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 CEP44Q9C0F1 390 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 KLC2Q9H0B6 622 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 CATSPERBQ9H7T0 1116 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 FZD3Q9NPG1 666 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 ZNHIT6Q9NWK9 470 aaKnown RBP13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 HECAQ9UBI9 543 aaPredicted RBP13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 NENFQ9UMX5 172 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 BTBD3Q9Y2F9 522 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 WASF2Q9Y6W5 498 aa13.88□□□□□ -0.19
VPS9D1-204ENST00000565023 SETXQ7Z333 2677 aaKnown RBP13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 A0A1W2PQU0 124 aa13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 SSU72P8A0A1W2PR75 194 aa13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 RASA4BC9J798 803 aa13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 EEF2KO00418 725 aaKnown RBP13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 KRIT1O00522 736 aa13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 VILLO15195 856 aa13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 DAPK3O43293 454 aa13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 RASA4O43374 803 aa13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 RNF8O76064 485 aa13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 CD160O95971 181 aa13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 EIF4A3P38919 411 aaKnown RBP13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 CCT8P50990 548 aa13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 TSR1Q2NL82 804 aaKnown RBP13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 ASTE1Q2TB18 679 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms