RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 CENPAP49450 140 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 SUOXP51687 545 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 SIX1Q15475 284 aaPredicted RBP3.4□□□□□ -1.86
CHD9-213ENST00000564845 PTGISQ16647 500 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 DPY19L1Q2PZI1 675 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 DCAF4L1Q3SXM0 396 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 DNAJC24Q6P3W2 148 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 PRR23BQ6ZRT6 265 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 TMC3Q7Z5M5 1100 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 RELTQ969Z4 430 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 BPIFA1Q9NP55 256 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 OSER1Q9NX31 292 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 PHF11Q9UIL8 331 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 STXBP5LQ9Y2K9 1186 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 AP4S1Q9Y587 144 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 NR1D1P20393 614 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 PAX7P23759 505 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 PNLIPRP1P54315 467 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 PDK2Q15119 407 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 ZMYND11Q15326 602 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 C14orf80Q86SX3 495 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 FAM228AQ86W67 206 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 PSTKQ8IV42 348 aaKnown RBP3.4□□□□□ -1.86
CHD9-213ENST00000564845 MOSPD2Q8NHP6 518 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 PTCD2Q8WV60 388 aaKnown RBP3.4□□□□□ -1.86
CHD9-213ENST00000564845 HES6Q96HZ4 224 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 ZNF514Q96K75 400 aaPredicted RBP3.4□□□□□ -1.86
CHD9-213ENST00000564845 AGAP2Q99490 1192 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 ADAM2Q99965 735 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 POLR3BQ9NW08 1133 aaPredicted RBP3.4□□□□□ -1.86
CHD9-213ENST00000564845 ZNF112Q9UJU3 913 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 CROTQ9UKG9 612 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 ST3GAL5Q9UNP4 418 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 SLC45A1Q9Y2W3 748 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 TRIP12Q14669 1992 aaPredicted RBP3.4□□□□□ -1.86
CHD9-213ENST00000564845 PSTPIP1O43586 416 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 LYPLA1O75608 230 aaPredicted RBP3.4□□□□□ -1.86
CHD9-213ENST00000564845 GZMAP12544 262 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 ARL1P40616 181 aaPredicted RBP3.4□□□□□ -1.86
CHD9-213ENST00000564845 SPOUT1Q5T280 376 aaKnown RBP3.4□□□□□ -1.86
CHD9-213ENST00000564845 OTOP3Q7RTS5 596 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 PTAR1Q7Z6K3 402 aaPredicted RBP3.4□□□□□ -1.86
CHD9-213ENST00000564845 BORCS5Q969J3 196 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 OMA1Q96E52 524 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 ZNF419Q96HQ0 510 aaPredicted RBP3.4□□□□□ -1.86
CHD9-213ENST00000564845 CLPTM1LQ96KA5 538 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 PIF1Q9H611 641 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 DDX43Q9NXZ2 648 aaKnown RBP3.4□□□□□ -1.86
CHD9-213ENST00000564845 AHSPQ9NZD4 102 aa3.4□□□□□ -1.86
CHD9-213ENST00000564845 A0A0B4J269 797 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 H3BRJ5 948 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 ABLIM1O14639 778 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 FAM163BP0C2L3 166 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 ITGB8P26012 769 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 NUDT1P36639 197 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 COILP38432 576 aaPredicted RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 PEX5P50542 639 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 CREB5Q02930 508 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 RABGAP1LQ5R372 815 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 AGAP9Q5VTM2 703 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 LINGO4Q6UY18 593 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 LRRTM3Q86VH5 581 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 PEX13Q92968 403 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 GORASP1Q9BQQ3 440 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 WDR83Q9BRX9 315 aaKnown RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 RSAD1Q9HA92 442 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 EVLQ9UI08 416 aaPredicted RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 ZNF638Q14966 1978 aaKnown RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 UPK3BL1B0FP48 263 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 UPK3BL2E5RIL1 263 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 H0YGN5 161 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 CLGNO14967 610 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 ADAM12O43184 909 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 TMEM63AO94886 807 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 C1QAP02745 245 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 PFKMP08237 780 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 ERVK-10P10266 1014 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 CCND1P24385 295 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 SCNN1AP37088 669 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 STAT5AP42229 794 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 ST8SIA6P61647 398 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 ZNF33AQ06730 810 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 TBC1D1Q86TI0 1168 aaPredicted RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 ST13P4Q8IZP2 240 aaPredicted RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 ITFG2Q969R8 447 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 PCED1BQ96HM7 432 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 SH3GL2Q99962 352 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 GRHL1Q9NZI5 618 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 NCKIPSDQ9NZQ3 722 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 SUFUQ9UMX1 484 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 NFS1Q9Y697 457 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 AURKAO14965 403 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 PLA2G6O60733 806 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 VNN2O95498 520 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 UNGP13051 313 aaPredicted RBP3.4□□□□□ -1.87
CHD9-213ENST00000564845 SERPINB1P30740 379 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 SULT1E1P49888 294 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 PLK1P53350 603 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 NME5P56597 212 aa3.4□□□□□ -1.87
CHD9-213ENST00000564845 IRF9Q00978 393 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms