RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 ZMPSTE24O75844 475 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 ENDOD1O94919 500 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 GJB6O95452 261 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 KRT3P12035 628 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 CKMT2P17540 419 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 HNF1BP35680 557 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 CLDN6P56747 220 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 SLC20A2Q08357 652 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 C15orf59Q2T9L4 293 aaPredicted RBP18.87■□□□□ 0.61
CLN6-204ENST00000564752 ZNF284Q2VY69 593 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 ARSIQ5FYB1 569 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 C22orf39Q6P5X5 142 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 FBXL19Q6PCT2 694 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 DPY19L3Q6ZPD9 716 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 ERN2Q76MJ5 926 aaKnown RBP18.87■□□□□ 0.61
CLN6-204ENST00000564752 PDZD3Q86UT5 571 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 C3orf20Q8ND61 904 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 KLK6Q92876 244 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 SPON2Q9BUD6 331 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 ZYG11BQ9C0D3 744 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 TNKS2Q9H2K2 1166 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 DYRK4Q9NR20 520 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 PPARGC1AQ9UBK2 798 aaKnown RBP18.87■□□□□ 0.61
CLN6-204ENST00000564752 IL36AQ9UHA7 158 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 MYO6Q9UM54 1294 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 LOC400499M0QZD8 3231 aa18.87■□□□□ 0.61
CLN6-204ENST00000564752 C2CD4BA6NLJ0 364 aa18.86■□□□□ 0.61
CLN6-204ENST00000564752 LEFTY1O75610 366 aa18.86■□□□□ 0.61
CLN6-204ENST00000564752 SERPINC1P01008 464 aa18.86■□□□□ 0.61
CLN6-204ENST00000564752 THEGLP0DJG4 465 aa18.86■□□□□ 0.61
CLN6-204ENST00000564752 PRLRP16471 622 aa18.86■□□□□ 0.61
CLN6-204ENST00000564752 PTMSP20962 102 aa18.86■□□□□ 0.61
CLN6-204ENST00000564752 PTPN9P43378 593 aa18.86■□□□□ 0.61
CLN6-204ENST00000564752 RECQLP46063 649 aaPredicted RBP18.86■□□□□ 0.61
CLN6-204ENST00000564752 TPM4P67936 248 aa18.86■□□□□ 0.61
CLN6-204ENST00000564752 ILKQ13418 452 aa18.86■□□□□ 0.61
CLN6-204ENST00000564752 IQCB1Q15051 598 aa18.86■□□□□ 0.61
CLN6-204ENST00000564752 ARL13BQ3SXY8 428 aa18.86■□□□□ 0.61
CLN6-204ENST00000564752 CCDC14Q49A88 953 aa18.86■□□□□ 0.61
CLN6-204ENST00000564752 RETSATQ6NUM9 610 aa18.86■□□□□ 0.61
CLN6-204ENST00000564752 MON1BQ7L1V2 547 aa18.86■□□□□ 0.61
CLN6-204ENST00000564752 SLC25A45Q8N413 288 aa18.86■□□□□ 0.61
CLN6-204ENST00000564752 BAP1Q92560 729 aa18.86■□□□□ 0.61
CLN6-204ENST00000564752 CEP44Q9C0F1 390 aa18.86■□□□□ 0.61
CLN6-204ENST00000564752 KLHL11Q9NVR0 708 aa18.86■□□□□ 0.61
CLN6-204ENST00000564752 ZFR2Q9UPR6 939 aaKnown RBP18.86■□□□□ 0.61
CLN6-204ENST00000564752 WASF2Q9Y6W5 498 aa18.86■□□□□ 0.61
CLN6-204ENST00000564752 ARID1BQ8NFD5 2236 aaPredicted RBP18.85■□□□□ 0.61
CLN6-204ENST00000564752 TP53BP1Q12888 1972 aaPredicted RBP18.85■□□□□ 0.61
CLN6-204ENST00000564752 A0A087WV48 116 aa18.85■□□□□ 0.61
CLN6-204ENST00000564752 A0A1B0GTH6 734 aa18.85■□□□□ 0.61
CLN6-204ENST00000564752 A0A1W2PQC6 194 aa18.85■□□□□ 0.61
CLN6-204ENST00000564752 LRRC53A6NM62 1247 aa18.85■□□□□ 0.61
CLN6-204ENST00000564752 SDC3O75056 442 aa18.85■□□□□ 0.61
CLN6-204ENST00000564752 GPD1P21695 349 aa18.85■□□□□ 0.61
CLN6-204ENST00000564752 SERPINH1P50454 418 aaKnown RBP18.85■□□□□ 0.61
CLN6-204ENST00000564752 GNA12Q03113 381 aa18.85■□□□□ 0.61
CLN6-204ENST00000564752 C1QBPQ07021 282 aaKnown RBP18.85■□□□□ 0.61
CLN6-204ENST00000564752 TARDBPQ13148 414 aaKnown RBP eCLIP18.85■□□□□ 0.61
CLN6-204ENST00000564752 PROX2Q3B8N5 592 aa18.85■□□□□ 0.61
CLN6-204ENST00000564752 HES3Q5TGS1 186 aa18.85■□□□□ 0.61
CLN6-204ENST00000564752 DNAJC24Q6P3W2 148 aa18.85■□□□□ 0.61
CLN6-204ENST00000564752 STRADAQ7RTN6 431 aa18.85■□□□□ 0.61
CLN6-204ENST00000564752 GRIN3AQ8TCU5 1115 aa18.85■□□□□ 0.61
CLN6-204ENST00000564752 PPP1R16AQ96I34 528 aa18.85■□□□□ 0.61
CLN6-204ENST00000564752 MYOCQ99972 504 aa18.85■□□□□ 0.61
CLN6-204ENST00000564752 ATP13A1Q9HD20 1204 aa18.85■□□□□ 0.61
CLN6-204ENST00000564752 ANKRD62A6NC57 917 aa18.84■□□□□ 0.61
CLN6-204ENST00000564752 TRIM38O00635 465 aa18.84■□□□□ 0.61
CLN6-204ENST00000564752 SIGLEC6O43699 453 aa18.84■□□□□ 0.61
CLN6-204ENST00000564752 PCDH8O95206 1070 aa18.84■□□□□ 0.61
CLN6-204ENST00000564752 HNRNPA2B1P22626 353 aaKnown RBP18.84■□□□□ 0.61
CLN6-204ENST00000564752 DGKAP23743 735 aa18.84■□□□□ 0.61
CLN6-204ENST00000564752 ACP1P24666 158 aa18.84■□□□□ 0.61
CLN6-204ENST00000564752 AKT2P31751 481 aa18.84■□□□□ 0.61
CLN6-204ENST00000564752 RFC1P35251 1148 aaPredicted RBP18.84■□□□□ 0.61
CLN6-204ENST00000564752 ADRA1BP35368 520 aa18.84■□□□□ 0.61
CLN6-204ENST00000564752 ARF5P84085 180 aa18.84■□□□□ 0.61
CLN6-204ENST00000564752 ZNF211Q13398 564 aaPredicted RBP18.84■□□□□ 0.61
CLN6-204ENST00000564752 ASIC2Q16515 512 aa18.84■□□□□ 0.61
CLN6-204ENST00000564752 TMEM259Q4ZIN3 620 aa18.84■□□□□ 0.61
CLN6-204ENST00000564752 RAB6CQ53S08 254 aa18.84■□□□□ 0.61
CLN6-204ENST00000564752 CARD16Q5EG05 197 aa18.84■□□□□ 0.61
CLN6-204ENST00000564752 SEL1L3Q68CR1 1132 aa18.84■□□□□ 0.61
CLN6-204ENST00000564752 CACTIN-AS1Q8N1I8 211 aa18.84■□□□□ 0.61
CLN6-204ENST00000564752 PCDH20Q8N6Y1 951 aaKnown RBP18.84■□□□□ 0.61
CLN6-204ENST00000564752 FAM172AQ8WUF8 416 aa18.84■□□□□ 0.61
CLN6-204ENST00000564752 HEPHQ9BQS7 1158 aa18.84■□□□□ 0.61
CLN6-204ENST00000564752 RAB6CQ9H0N0 254 aa18.84■□□□□ 0.61
CLN6-204ENST00000564752 CBX8Q9HC52 389 aa18.84■□□□□ 0.61
CLN6-204ENST00000564752 FZD3Q9NPG1 666 aa18.84■□□□□ 0.61
CLN6-204ENST00000564752 OR12D3Q9UGF7 316 aa18.84■□□□□ 0.61
CLN6-204ENST00000564752 CXorf51AA0A1B0GTR3 108 aa18.83■□□□□ 0.6
CLN6-204ENST00000564752 SIGLEC16A6NMB1 481 aa18.83■□□□□ 0.6
CLN6-204ENST00000564752 CD160O95971 181 aa18.83■□□□□ 0.6
CLN6-204ENST00000564752 TNFAIP3P21580 790 aa18.83■□□□□ 0.6
CLN6-204ENST00000564752 NEK3P51956 506 aa18.83■□□□□ 0.6
CLN6-204ENST00000564752 NRG1Q02297 640 aaPredicted RBP18.83■□□□□ 0.6
CLN6-204ENST00000564752 ACAD10Q6JQN1 1059 aa18.83■□□□□ 0.6
CLN6-204ENST00000564752 PPP1R2P3Q6NXS1 205 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms