RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 MYLK3Q32MK0 819 aa16.25■□□□□ 0.19
RAB40C-208ENST00000564703 CCDC181Q5TID7 509 aa16.25■□□□□ 0.19
RAB40C-208ENST00000564703 TIGD7Q6NT04 549 aaPredicted RBP16.25■□□□□ 0.19
RAB40C-208ENST00000564703 USP30Q70CQ3 517 aa16.25■□□□□ 0.19
RAB40C-208ENST00000564703 FAM124AQ86V42 546 aa16.25■□□□□ 0.19
RAB40C-208ENST00000564703 HDDC3Q8N4P3 179 aa16.25■□□□□ 0.19
RAB40C-208ENST00000564703 PQLC3Q8N755 202 aa16.25■□□□□ 0.19
RAB40C-208ENST00000564703 PIP4K2CQ8TBX8 421 aa16.25■□□□□ 0.19
RAB40C-208ENST00000564703 KRT35Q92764 455 aa16.25■□□□□ 0.19
RAB40C-208ENST00000564703 FAM122AQ96E09 287 aa16.25■□□□□ 0.19
RAB40C-208ENST00000564703 GDAP1L1Q96MZ0 367 aa16.25■□□□□ 0.19
RAB40C-208ENST00000564703 BTBD1Q9H0C5 482 aa16.25■□□□□ 0.19
RAB40C-208ENST00000564703 PABPC3Q9H361 631 aaKnown RBP16.25■□□□□ 0.19
RAB40C-208ENST00000564703 HAUS2Q9NVX0 235 aa16.25■□□□□ 0.19
RAB40C-208ENST00000564703 USP36Q9P275 1121 aaKnown RBP16.25■□□□□ 0.19
RAB40C-208ENST00000564703 PPM1HQ9ULR3 514 aa16.25■□□□□ 0.19
RAB40C-208ENST00000564703 IGHV1OR15-9A0A0B4J2B8 117 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 PROB1E7EW31 1015 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 KPNA3O00505 521 aaPredicted RBP16.24■□□□□ 0.19
RAB40C-208ENST00000564703 KRIT1O00522 736 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 MID1O15344 667 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 CST8O60676 142 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 FTCDO95954 541 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 CCNCP24863 283 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 GARSP41250 739 aaKnown RBP16.24■□□□□ 0.19
RAB40C-208ENST00000564703 CCNHP51946 323 aaPredicted RBP16.24■□□□□ 0.19
RAB40C-208ENST00000564703 DYNLT1P63172 113 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 GALNT2Q10471 571 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 LBRQ14739 615 aaKnown RBP16.24■□□□□ 0.19
RAB40C-208ENST00000564703 CYTH1Q15438 398 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 LPAL2Q16609 132 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 ARSIQ5FYB1 569 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 MARC1Q5VT66 337 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 SLC9A4Q6AI14 798 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 ARHGAP36Q6ZRI8 547 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 TP53INP2Q8IXH6 220 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 FAM160A2Q8N612 972 aaPredicted RBP16.24■□□□□ 0.19
RAB40C-208ENST00000564703 TOE1Q96GM8 510 aaKnown RBP16.24■□□□□ 0.19
RAB40C-208ENST00000564703 PPP1R16AQ96I34 528 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 LRIG1Q96JA1 1093 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 ZC3H10Q96K80 434 aaKnown RBP16.24■□□□□ 0.19
RAB40C-208ENST00000564703 ZDHHC6Q9H6R6 413 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 PDFQ9HBH1 243 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 WSB2Q9NYS7 404 aaPredicted RBP16.24■□□□□ 0.19
RAB40C-208ENST00000564703 SEPT3Q9UH03 358 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 GMEB2Q9UKD1 530 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 FANCMQ8IYD8 2048 aa16.24■□□□□ 0.19
RAB40C-208ENST00000564703 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 A0A1W2PP55 124 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 MFSD11O43934 449 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 MAFKO60675 156 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 ZNF821O75541 412 aaPredicted RBP16.23■□□□□ 0.19
RAB40C-208ENST00000564703 LEFTY1O75610 366 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 C7P10643 843 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 KRT10P13645 584 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 NR2C2P49116 596 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 DHPSP49366 369 aaPredicted RBP16.23■□□□□ 0.19
RAB40C-208ENST00000564703 GBE1Q04446 702 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 NSUN2Q08J23 767 aaKnown RBP eCLIP16.23■□□□□ 0.19
RAB40C-208ENST00000564703 ZNF235Q14590 738 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 GRM3Q14832 879 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 PDK1Q15118 436 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 LLGL1Q15334 1064 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 PLK5Q496M5 336 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 SPDYCQ5MJ68 293 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 LAIR1Q6GTX8 287 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.23■□□□□ 0.19
RAB40C-208ENST00000564703 TMEFF1Q8IYR6 380 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 PAF1Q8N7H5 531 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 PLD5Q8N7P1 536 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 FRMD1Q8N878 549 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 CHST14Q8NCH0 376 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 GRIN3AQ8TCU5 1115 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 P3H4Q92791 437 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 FOXJ1Q92949 421 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 TSGA13Q96PP4 275 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 HEMGNQ9BXL5 484 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 NEUROG2Q9H2A3 272 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 SGK2Q9HBY8 427 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 SMG5Q9UPR3 1016 aaKnown RBP16.23■□□□□ 0.19
RAB40C-208ENST00000564703 CAPN6Q9Y6Q1 641 aa16.23■□□□□ 0.19
RAB40C-208ENST00000564703 MUC22E2RYF6 1773 aaPredicted RBP16.23■□□□□ 0.19
RAB40C-208ENST00000564703 ABCA7Q8IZY2 2146 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 SDK1Q7Z5N4 2213 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 LRRC72A6NJI9 287 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 PPP1R12AO14974 1030 aaPredicted RBP16.22■□□□□ 0.19
RAB40C-208ENST00000564703 MAP3K6O95382 1288 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 IGLV3-19P01714 112 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 BCKDHBP21953 392 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 TGM2P21980 687 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 HSPA9P38646 679 aaKnown RBP16.22■□□□□ 0.19
RAB40C-208ENST00000564703 MARCKSL1P49006 195 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 PEX5P50542 639 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 HNRNPDQ14103 355 aaKnown RBP16.22■□□□□ 0.19
RAB40C-208ENST00000564703 PPP2R5EQ16537 467 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 POM121L1PQ3SYA9 428 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 SYCP2LQ5T4T6 812 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 ATXN7L2Q5T6C5 722 aaPredicted RBP16.22■□□□□ 0.19
RAB40C-208ENST00000564703 DEFB119Q8N690 84 aa16.22■□□□□ 0.19
RAB40C-208ENST00000564703 TRIM58Q8NG06 486 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms