RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 LEFTY2O00292 366 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 FAM155BO75949 473 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 MYOGP15173 224 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 EPCAMP16422 314 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 IRS1P35568 1242 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 WNT3AP56704 352 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 MGAT5Q09328 741 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 DNAJC3Q13217 504 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 RALGPS1Q5JS13 557 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 FAM182AQ5T1J6 154 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 RNF219Q5W0B1 726 aaPredicted RBP15.79■□□□□ 0.12
COMMD4-210ENST00000564587 KDELC1Q6UW63 502 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 LEKR1Q6ZMV7 388 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 MARK2Q7KZI7 788 aaKnown RBP15.79■□□□□ 0.12
COMMD4-210ENST00000564587 SRRM1Q8IYB3 904 aaKnown RBP15.79■□□□□ 0.12
COMMD4-210ENST00000564587 CYP4X1Q8N118 509 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 PPM1NQ8N819 430 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 TDRD5Q8NAT2 981 aaKnown RBP15.79■□□□□ 0.12
COMMD4-210ENST00000564587 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.79■□□□□ 0.12
COMMD4-210ENST00000564587 PPHLN1Q8NEY8 458 aaKnown RBP15.79■□□□□ 0.12
COMMD4-210ENST00000564587 OR7D4Q8NG98 312 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 SPATA22Q8NHS9 363 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 GABPB2Q8TAK5 448 aaPredicted RBP15.79■□□□□ 0.12
COMMD4-210ENST00000564587 WBP2Q969T9 261 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 TADA1Q96BN2 335 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 MRGPRX2Q96LB1 330 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 PSKH2Q96QS6 385 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 CDCA3Q99618 268 aaPredicted RBP15.79■□□□□ 0.12
COMMD4-210ENST00000564587 FICDQ9BVA6 458 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 KIFC1Q9BW19 673 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 CINPQ9BW66 212 aaPredicted RBP15.79■□□□□ 0.12
COMMD4-210ENST00000564587 MUC3BQ9H195 1237 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 TRABDQ9H4I3 376 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 INTS9Q9NV88 658 aaKnown RBP15.79■□□□□ 0.12
COMMD4-210ENST00000564587 NSMCE4AQ9NXX6 385 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 NKIRAS1Q9NYS0 192 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 UBP1Q9NZI7 540 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 TBC1D14Q9P2M4 693 aa15.79■□□□□ 0.12
COMMD4-210ENST00000564587 DNMT3BQ9UBC3 853 aaKnown RBP15.79■□□□□ 0.12
COMMD4-210ENST00000564587 A0A0D9SEW6 157 aa15.78■□□□□ 0.12
COMMD4-210ENST00000564587 GRXCR1A8MXD5 290 aa15.78■□□□□ 0.12
COMMD4-210ENST00000564587 PRPF4O43172 522 aaKnown RBP eCLIP15.78■□□□□ 0.122e-7■■■■■ 39.9
COMMD4-210ENST00000564587 USP12O75317 370 aa15.78■□□□□ 0.12
COMMD4-210ENST00000564587 PMPCBO75439 489 aa15.78■□□□□ 0.12
COMMD4-210ENST00000564587 PAPLNO95428 1278 aa15.78■□□□□ 0.12
COMMD4-210ENST00000564587 MT-CYBP00156 380 aaPredicted RBP15.78■□□□□ 0.12
COMMD4-210ENST00000564587 C1QAP02745 245 aa15.78■□□□□ 0.12
COMMD4-210ENST00000564587 SNRPAP09012 282 aaKnown RBP15.78■□□□□ 0.12
COMMD4-210ENST00000564587 ADRA1DP25100 572 aa15.78■□□□□ 0.12
COMMD4-210ENST00000564587 SLC12A1Q13621 1099 aa15.78■□□□□ 0.12
COMMD4-210ENST00000564587 CDH18Q13634 790 aa15.78■□□□□ 0.12
COMMD4-210ENST00000564587 ANKRD20A4Q4UJ75 823 aa15.78■□□□□ 0.12
COMMD4-210ENST00000564587 INO80DQ53TQ3 878 aaPredicted RBP15.78■□□□□ 0.12
COMMD4-210ENST00000564587 CXorf57Q6NSI4 855 aaKnown RBP15.78■□□□□ 0.12
COMMD4-210ENST00000564587 NLRP9Q7RTR0 991 aa15.78■□□□□ 0.12
COMMD4-210ENST00000564587 PRPF39Q86UA1 669 aaKnown RBP15.78■□□□□ 0.12
COMMD4-210ENST00000564587 CARNMT1Q8N4J0 409 aa15.78■□□□□ 0.12
COMMD4-210ENST00000564587 PPP2R3CQ969Q6 453 aa15.78■□□□□ 0.12
COMMD4-210ENST00000564587 OTUB2Q96DC9 234 aa15.78■□□□□ 0.12
COMMD4-210ENST00000564587 CERS2Q96G23 380 aa15.78■□□□□ 0.12
COMMD4-210ENST00000564587 SGSM3Q96HU1 749 aa15.78■□□□□ 0.12
COMMD4-210ENST00000564587 RANBP9Q96S59 729 aa15.78■□□□□ 0.12
COMMD4-210ENST00000564587 MGME1Q9BQP7 344 aa15.78■□□□□ 0.12
COMMD4-210ENST00000564587 PLAC1Q9HBJ0 212 aa15.78■□□□□ 0.12
COMMD4-210ENST00000564587 KCNK9Q9NPC2 374 aa15.78■□□□□ 0.12
COMMD4-210ENST00000564587 HELZP42694 1942 aaKnown RBP15.78■□□□□ 0.12
COMMD4-210ENST00000564587 TMEM120BA0PK00 339 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 FAM47DPA6NHR8 397 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 ATP9BO43861 1147 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 RFPL2O75678 378 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 ARHGEF15O94989 841 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 MT-ND3P03897 115 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 SERPINF2P08697 491 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 CHN1P15882 459 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 PAMP19021 973 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 HLA-DPA1P20036 260 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 WEE1P30291 646 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 LSP1P33241 339 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 CD86P42081 329 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 GUCY1A3Q02108 690 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 EFTUD2Q15029 972 aaKnown RBP eCLIP15.77■□□□□ 0.12
COMMD4-210ENST00000564587 TEAD2Q15562 447 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 PRSS36Q5K4E3 855 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 RNF43Q68DV7 783 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 PKN3Q6P5Z2 889 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 MFN1Q8IWA4 741 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 DCAF4L2Q8NA75 395 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 ARRDC2Q8TBH0 407 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 SH3RF2Q8TEC5 729 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 DDI1Q8WTU0 396 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 ACDQ96AP0 544 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 ZNF669Q96BR6 464 aaPredicted RBP15.77■□□□□ 0.12
COMMD4-210ENST00000564587 MRRFQ96E11 262 aaKnown RBP15.77■□□□□ 0.12
COMMD4-210ENST00000564587 ZNF419Q96HQ0 510 aaPredicted RBP15.77■□□□□ 0.12
COMMD4-210ENST00000564587 FEM1CQ96JP0 617 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 SEMA3CQ99985 751 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 C2orf49Q9BVC5 232 aaPredicted RBP15.77■□□□□ 0.12
COMMD4-210ENST00000564587 TLE6Q9H808 572 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 KIF9Q9HAQ2 790 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 KIAA1522Q9P206 1035 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms