RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 ESPL1Q14674 2120 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 D6RAR5 112 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 LMO7DNF2Z398 122 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 K7ERQ8 282 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 HAX1O00165 279 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 NTN3O00634 580 aaPredicted RBP7.48□□□□□ -1.21
VPS4A-203ENST00000564399 NEMP1O14524 444 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 CETN3O15182 167 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 YY2O15391 372 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 SPINT1O43278 529 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 ACTN4O43707 911 aaKnown RBP7.48□□□□□ -1.21
VPS4A-203ENST00000564399 SNAP91O60641 907 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 GCATO75600 419 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 LEFTY1O75610 366 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 ENDOD1O94919 500 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 MT-CO1P00395 513 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 CALCAP01258 141 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 RPLP0P05388 317 aaKnown RBP7.48□□□□□ -1.21
VPS4A-203ENST00000564399 SLC2A3P11169 496 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 SRCP12931 536 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 RRM1P23921 792 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 TBXAS1P24557 533 aaPredicted RBP7.48□□□□□ -1.21
VPS4A-203ENST00000564399 NEK3P51956 506 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 MAPK10P53779 464 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 KRT83P78385 493 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 CCL7P80098 99 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 MORC3Q14149 939 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 PTK2BQ14289 1009 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 FGL2Q14314 439 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 CLCA4Q14CN2 919 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 NCAPHQ15003 741 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 STILQ15468 1287 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 CBWD6Q4V339 395 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 ARSIQ5FYB1 569 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 CBWD3Q5JTY5 395 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 CBWD5Q5RIA9 395 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 TPRG1LQ5T0D9 272 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 FAXCQ5TGI0 409 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 PHACTR4Q8IZ21 702 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 SDR16C5Q8N3Y7 309 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 OR52K2Q8NGK3 314 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 OR2A12Q8NGT7 310 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 ZNF564Q8TBZ8 553 aaPredicted RBP7.48□□□□□ -1.21
VPS4A-203ENST00000564399 SCG3Q8WXD2 468 aaKnown RBP7.48□□□□□ -1.21
VPS4A-203ENST00000564399 TMEM74Q96NL1 305 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 PRMT1Q99873 361 aaKnown RBP7.48□□□□□ -1.21
VPS4A-203ENST00000564399 C2orf49Q9BVC5 232 aaPredicted RBP7.48□□□□□ -1.21
VPS4A-203ENST00000564399 HDAC8Q9BY41 377 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 CPEB1Q9BZB8 566 aaKnown RBP7.48□□□□□ -1.21
VPS4A-203ENST00000564399 EPN3Q9H201 632 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 TNKS2Q9H2K2 1166 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 ADNPQ9H2P0 1102 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 TCEAL2Q9H3H9 227 aaPredicted RBP7.48□□□□□ -1.21
VPS4A-203ENST00000564399 FAM204AQ9H8W3 233 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 LRRC4CQ9HCJ2 640 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 GPR27Q9NS67 375 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 SIRPGQ9P1W8 387 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 IL36AQ9UHA7 158 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 VANGL2Q9ULK5 521 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 HS3ST2Q9Y278 367 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 MAN2B2Q9Y2E5 1009 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 LOXL2Q9Y4K0 774 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 CHD5Q8TDI0 1954 aa7.48□□□□□ -1.21
VPS4A-203ENST00000564399 UTP20O75691 2785 aaKnown RBP7.48□□□□□ -1.21
VPS4A-203ENST00000564399 DOPEY1Q5JWR5 2465 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 CENPEQ02224 2701 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 ABCA12Q86UK0 2595 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 PRAMEF33A0A0G2JMD5 474 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 BLACEA4D250 179 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 IGLON5A6NGN9 336 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 M0QYT0 321 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 RNF103O00237 685 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 SMAD6O43541 496 aaKnown RBP7.47□□□□□ -1.21
VPS4A-203ENST00000564399 PRAMEF10O60809 474 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 CLDN11O75508 207 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 RHOCP08134 193 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 ADRB3P13945 408 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 TSHRP16473 764 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 WT1P19544 449 aaPredicted RBP7.47□□□□□ -1.21
VPS4A-203ENST00000564399 ITIH1P19827 911 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 CCR1P32246 355 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 GGCXP38435 758 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 ACADSBP45954 432 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 DNA2P51530 1060 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 IRAK1P51617 712 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 YWHAZP63104 245 aaKnown RBP7.47□□□□□ -1.21
VPS4A-203ENST00000564399 PITX1P78337 314 aaPredicted RBP7.47□□□□□ -1.21
VPS4A-203ENST00000564399 FOXK1P85037 733 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 CDK17Q00537 523 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 AUHQ13825 339 aaKnown RBP7.47□□□□□ -1.21
VPS4A-203ENST00000564399 TCEA2Q15560 299 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 C22orf39Q6P5X5 142 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 LINGO4Q6UY18 593 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 DPY19L3Q6ZPD9 716 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 GUF1Q8N442 669 aaKnown RBP7.47□□□□□ -1.21
VPS4A-203ENST00000564399 FAM26EQ8N5C1 309 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 UBR7Q8N806 425 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 HTR3CQ8WXA8 447 aa7.47□□□□□ -1.21
VPS4A-203ENST00000564399 JPH3Q8WXH2 748 aaPredicted RBP7.47□□□□□ -1.21
VPS4A-203ENST00000564399 USP7Q93009 1102 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms