RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 NEU3Q9UQ49 428 aa18.02■□□□□ 0.48
NME3-205ENST00000563854 WASF2Q9Y6W5 498 aa18.02■□□□□ 0.48
NME3-205ENST00000563854 CFAP47Q6ZTR5 3102 aa18.02■□□□□ 0.47
NME3-205ENST00000563854 IGF2RP11717 2491 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 KNL1Q8NG31 2342 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 ZFHX4Q86UP3 3567 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 SPEGQ15772 3267 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 LRRC53A6NM62 1247 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 SMTNL1A8MU46 457 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 YKT6O15498 198 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 MAGEC1O60732 1142 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 SDC3O75056 442 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 ZNF821O75541 412 aaPredicted RBP18.01■□□□□ 0.47
NME3-205ENST00000563854 DESP17661 470 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 EPHB2P29323 1055 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 GKP32189 559 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 ZNF143P52747 638 aaPredicted RBP18.01■□□□□ 0.47
NME3-205ENST00000563854 RPL7AP62424 266 aaKnown RBP18.01■□□□□ 0.47
NME3-205ENST00000563854 BNIP3Q12983 259 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 MAPK8IP2Q13387 824 aaPredicted RBP18.01■□□□□ 0.47
NME3-205ENST00000563854 POLD3Q15054 466 aaPredicted RBP18.01■□□□□ 0.47
NME3-205ENST00000563854 ASIC2Q16515 512 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 FILIP1LQ4L180 1135 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 SEL1L3Q68CR1 1132 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 FBXL19Q6PCT2 694 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 HORMAD1Q86X24 394 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 MARCH9Q86YJ5 346 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 MCOLN2Q8IZK6 566 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 OXR1Q8N573 874 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 SAP25Q8TEE9 199 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 KLHDC7BQ96G42 594 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 CNDP2Q96KP4 475 aaKnown RBP18.01■□□□□ 0.47
NME3-205ENST00000563854 HDAC8Q9BY41 377 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 TAS2R14Q9NYV8 317 aa18.01■□□□□ 0.47
NME3-205ENST00000563854 HECAQ9UBI9 543 aaPredicted RBP18.01■□□□□ 0.47
NME3-205ENST00000563854 ENC1O14682 589 aa18■□□□□ 0.47
NME3-205ENST00000563854 ATMINO43313 823 aaPredicted RBP18■□□□□ 0.47
NME3-205ENST00000563854 LDOC1O95751 146 aaPredicted RBP18■□□□□ 0.47
NME3-205ENST00000563854 ADRB3P13945 408 aa18■□□□□ 0.47
NME3-205ENST00000563854 AKT2P31751 481 aa18■□□□□ 0.47
NME3-205ENST00000563854 GEMIN4P57678 1058 aaKnown RBP18■□□□□ 0.47
NME3-205ENST00000563854 SCAPQ12770 1279 aa18■□□□□ 0.47
NME3-205ENST00000563854 ZNF284Q2VY69 593 aa18■□□□□ 0.47
NME3-205ENST00000563854 NEK5Q6P3R8 708 aa18■□□□□ 0.47
NME3-205ENST00000563854 DHRS13Q6UX07 377 aa18■□□□□ 0.47
NME3-205ENST00000563854 PARS2Q7L3T8 475 aaKnown RBP18■□□□□ 0.47
NME3-205ENST00000563854 IQCHQ86VS3 1027 aa18■□□□□ 0.47
NME3-205ENST00000563854 EPAS1Q99814 870 aa18■□□□□ 0.47
NME3-205ENST00000563854 BPIFA3Q9BQP9 254 aa18■□□□□ 0.47
NME3-205ENST00000563854 CALN1Q9BXU9 219 aa18■□□□□ 0.47
NME3-205ENST00000563854 MAGEH1Q9H213 219 aa18■□□□□ 0.47
NME3-205ENST00000563854 RTN4Q9NQC3 1192 aaKnown RBP18■□□□□ 0.47
NME3-205ENST00000563854 ZFR2Q9UPR6 939 aaKnown RBP18■□□□□ 0.47
NME3-205ENST00000563854 TCRBV5S1A1TA0A578 114 aa17.99■□□□□ 0.47
NME3-205ENST00000563854 FAM149AA5PLN7 773 aa17.99■□□□□ 0.47
NME3-205ENST00000563854 FAM221BA6H8Z2 402 aa17.99■□□□□ 0.47
NME3-205ENST00000563854 KRIT1O00522 736 aa17.99■□□□□ 0.47
NME3-205ENST00000563854 BUB1O43683 1085 aa17.99■□□□□ 0.47
NME3-205ENST00000563854 CD160O95971 181 aa17.99■□□□□ 0.47
NME3-205ENST00000563854 THEGLP0DJG4 465 aa17.99■□□□□ 0.47
NME3-205ENST00000563854 HNRNPA2B1P22626 353 aaKnown RBP17.99■□□□□ 0.47
NME3-205ENST00000563854 ITGB7P26010 798 aa17.99■□□□□ 0.47
NME3-205ENST00000563854 L1CAMP32004 1257 aa17.99■□□□□ 0.47
NME3-205ENST00000563854 ZNF165P49910 485 aa17.99■□□□□ 0.47
NME3-205ENST00000563854 CLDN2P57739 230 aa17.99■□□□□ 0.47
NME3-205ENST00000563854 DNAJC3Q13217 504 aa17.99■□□□□ 0.47
NME3-205ENST00000563854 ATXN7L2Q5T6C5 722 aaPredicted RBP17.99■□□□□ 0.47
NME3-205ENST00000563854 CCNI2Q6ZMN8 369 aaPredicted RBP17.99■□□□□ 0.47
NME3-205ENST00000563854 IRF2BP2Q7Z5L9 587 aa17.99■□□□□ 0.47
NME3-205ENST00000563854 DNAAF5Q86Y56 855 aa17.99■□□□□ 0.47
NME3-205ENST00000563854 RTL3Q8N8U3 475 aaKnown RBP17.99■□□□□ 0.47
NME3-205ENST00000563854 NETO2Q8NC67 525 aa17.99■□□□□ 0.47
NME3-205ENST00000563854 BAP1Q92560 729 aa17.99■□□□□ 0.47
NME3-205ENST00000563854 CNPY3Q9BT09 278 aa17.99■□□□□ 0.47
NME3-205ENST00000563854 ERVMER34-1Q9H9K5 563 aa17.99■□□□□ 0.47
NME3-205ENST00000563854 GPATCH2LQ9NWQ4 482 aa17.99■□□□□ 0.47
NME3-205ENST00000563854 FZD10Q9ULW2 581 aa17.99■□□□□ 0.47
NME3-205ENST00000563854 ASPMQ8IZT6 3477 aa17.99■□□□□ 0.47
NME3-205ENST00000563854 SRRM3A6NNA2 597 aaPredicted RBP17.98■□□□□ 0.47
NME3-205ENST00000563854 PSMA2P25787 234 aa17.98■□□□□ 0.47
NME3-205ENST00000563854 SNRPD1P62314 119 aaKnown RBP17.98■□□□□ 0.47
NME3-205ENST00000563854 OGDHQ02218 1023 aa17.98■□□□□ 0.47
NME3-205ENST00000563854 OVGP1Q12889 678 aa17.98■□□□□ 0.47
NME3-205ENST00000563854 PPP1R15BQ5SWA1 713 aa17.98■□□□□ 0.47
NME3-205ENST00000563854 TMC6Q7Z403 805 aa17.98■□□□□ 0.47
NME3-205ENST00000563854 PTAR1Q7Z6K3 402 aaPredicted RBP17.98■□□□□ 0.47
NME3-205ENST00000563854 TMEM145Q8NBT3 493 aa17.98■□□□□ 0.47
NME3-205ENST00000563854 OR13H1Q8NG92 308 aa17.98■□□□□ 0.47
NME3-205ENST00000563854 OR2AP1Q8NGE2 309 aa17.98■□□□□ 0.47
NME3-205ENST00000563854 ISG20Q96AZ6 181 aaKnown RBP17.98■□□□□ 0.47
NME3-205ENST00000563854 RETREG1Q9H6L5 497 aa17.98■□□□□ 0.47
NME3-205ENST00000563854 MYO6Q9UM54 1294 aa17.98■□□□□ 0.47
NME3-205ENST00000563854 ITM2BQ9Y287 266 aa17.98■□□□□ 0.47
NME3-205ENST00000563854 CABIN1Q9Y6J0 2220 aa17.98■□□□□ 0.47
NME3-205ENST00000563854 DOCK9Q9BZ29 2069 aa17.97■□□□□ 0.47
NME3-205ENST00000563854 NEMP1O14524 444 aa17.97■□□□□ 0.47
NME3-205ENST00000563854 KDELR3O43731 214 aa17.97■□□□□ 0.47
NME3-205ENST00000563854 TMCC1O94876 653 aa17.97■□□□□ 0.47
NME3-205ENST00000563854 SERPINC1P01008 464 aa17.97■□□□□ 0.47
NME3-205ENST00000563854 UGT2B4P06133 528 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms