RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 KLHL32Q96NJ5 620 aa11.99□□□□□ -0.49
ABCA3-203ENST00000563623 EFHD1Q9BUP0 239 aa11.99□□□□□ -0.49
ABCA3-203ENST00000563623 POMKQ9H5K3 350 aa11.99□□□□□ -0.49
ABCA3-203ENST00000563623 NOL11Q9H8H0 719 aaKnown RBP11.99□□□□□ -0.49
ABCA3-203ENST00000563623 DMTF1Q9Y222 760 aa11.99□□□□□ -0.49
ABCA3-203ENST00000563623 COPG1Q9Y678 874 aaKnown RBP11.99□□□□□ -0.49
ABCA3-203ENST00000563623 COL4A5P29400 1685 aa11.99□□□□□ -0.49
ABCA3-203ENST00000563623 RNF103-CHMP3A0A140T963 221 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 CASQ2O14958 399 aaPredicted RBP11.98□□□□□ -0.49
ABCA3-203ENST00000563623 E2F6O75461 281 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 TRMUO75648 421 aaKnown RBP11.98□□□□□ -0.49
ABCA3-203ENST00000563623 TIPRLO75663 272 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 CKMT2P17540 419 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 GLDCP23378 1020 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 GRM2Q14416 872 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 SLC25A52Q3SY17 297 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 ITPRIPL1Q6GPH6 555 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 KLC3Q6P597 504 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 AFAP1L2Q8N4X5 818 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 PNPLA1Q8N8W4 532 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 NCSTNQ92542 709 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 LPGAT1Q92604 370 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 TMIGD2Q96BF3 282 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 OSMRQ99650 979 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 NXF3Q9H4D5 531 aaKnown RBP11.98□□□□□ -0.49
ABCA3-203ENST00000563623 C9JVG2 144 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 RECQL4O94761 1208 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 TOMM70O94826 608 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 AP2A1O95782 977 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 STMN1P16949 149 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 PCSK6P29122 969 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 TKTL1P51854 596 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 ITKQ08881 620 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 FASTKQ14296 549 aaKnown RBP11.98□□□□□ -0.49
ABCA3-203ENST00000563623 TRIM67Q6ZTA4 783 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 APOBEC3FQ8IUX4 373 aaKnown RBP11.98□□□□□ -0.49
ABCA3-203ENST00000563623 SLC39A3Q9BRY0 314 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 NME7Q9Y5B8 376 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 TIMM13Q9Y5L4 95 aaPredicted RBP11.98□□□□□ -0.49
ABCA3-203ENST00000563623 E7ENX8 843 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 TRIM38O00635 465 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 H2AFYO75367 372 aaKnown RBP11.98□□□□□ -0.49
ABCA3-203ENST00000563623 CABYRO75952 493 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 APOA4P06727 396 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 HSPA13P48723 471 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 ESRRGP62508 458 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 SLC12A1Q13621 1099 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 ITGA7Q13683 1181 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 PIGGQ5H8A4 983 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 ZNF484Q5JVG2 852 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 ZYG11AQ6WRX3 759 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 CYS1Q717R9 158 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 STRADAQ7RTN6 431 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 FTHL17Q9BXU8 183 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 DRC3Q9H069 523 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 UPF3AQ9H1J1 476 aaKnown RBP11.98□□□□□ -0.49
ABCA3-203ENST00000563623 PIGVQ9NUD9 493 aa11.98□□□□□ -0.49
ABCA3-203ENST00000563623 FAM95CA0A1B0GW59 222 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 HEATR9A2RTY3 570 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 GRID2O43424 1007 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 DENRO43583 198 aaKnown RBP11.97□□□□□ -0.49
ABCA3-203ENST00000563623 DLX3O60479 287 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 ZBTB7AO95365 584 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 RPL10P27635 214 aaKnown RBP11.97□□□□□ -0.49
ABCA3-203ENST00000563623 CASP2P42575 452 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 DPP6P42658 865 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 MAPK10P53779 464 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 ZNF280AP59817 542 aaPredicted RBP11.97□□□□□ -0.49
ABCA3-203ENST00000563623 DCTN2Q13561 401 aaKnown RBP11.97□□□□□ -0.49
ABCA3-203ENST00000563623 RPS6KA2Q15349 733 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 FAM219BQ5XKK7 198 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 GRAMD4Q6IC98 578 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 CLVS1Q8IUQ0 354 aaPredicted RBP11.97□□□□□ -0.49
ABCA3-203ENST00000563623 HERC6Q8IVU3 1022 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 AHI1Q8N157 1196 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 GRIN3AQ8TCU5 1115 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 TNIP3Q96KP6 325 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 ULBP1Q9BZM6 244 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 VRTNQ9H8Y1 702 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 CACNG4Q9UBN1 327 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 PIN4Q9Y237 131 aaKnown RBP11.97□□□□□ -0.49
ABCA3-203ENST00000563623 V9GYQ6 96 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 UBDO15205 165 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 ALOX15P16050 662 aaPredicted RBP11.97□□□□□ -0.49
ABCA3-203ENST00000563623 ZNF24P17028 368 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 STX1BP61266 288 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 HPCAP84074 193 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 ARMCX2Q7L311 632 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 SAPCD2Q86UD0 394 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 NT5DC4Q86YG4 428 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 WNT8BQ93098 351 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 RMND5BQ96G75 393 aaPredicted RBP11.97□□□□□ -0.49
ABCA3-203ENST00000563623 ZNF512Q96ME7 567 aaPredicted RBP11.97□□□□□ -0.49
ABCA3-203ENST00000563623 TSPAN18Q96SJ8 248 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 FICDQ9BVA6 458 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 EIF2B3Q9NR50 452 aaKnown RBP11.97□□□□□ -0.49
ABCA3-203ENST00000563623 RIMS3Q9UJD0 308 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 MRASO14807 208 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 MAGEB3O15480 346 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 MT-CYBP00156 380 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms