RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ZMAT4Q9H898 229 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 SACM1LQ9NTJ5 587 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 TBC1D13Q9NVG8 400 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 UXTQ9UBK9 157 aaPredicted RBP4.87□□□□□ -1.63
SMG1-207ENST00000563235 DNAJB11Q9UBS4 358 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 HESX1Q9UBX0 185 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 EMC9Q9Y3B6 208 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 PPIL1Q9Y3C6 166 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 STRAPQ9Y3F4 350 aaKnown RBP4.87□□□□□ -1.63
SMG1-207ENST00000563235 PCDHB1Q9Y5F3 818 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 KIDINS220Q9ULH0 1771 aa4.87□□□□□ -1.63
SMG1-207ENST00000563235 CHD4Q14839 1912 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 C1orf232A0A0U1RR37 186 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 C2orf92A0A1B0GVN3 265 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 SH3D21A4FU49 640 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 BTBD18B2RXH4 712 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 TMEM232C9JQI7 657 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 E7ENQ6 273 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 HRKO00198 91 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 AQP7O14520 342 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 KCNK3O14649 394 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 WDR46O15213 610 aaKnown RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 RAD51BO15315 384 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 SLC16A3O15427 465 aaKnown RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 NPHS1O60500 1241 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 CRTAPO75718 401 aaPredicted RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 RBBP9O75884 186 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 OR2C1O95371 312 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 ALOX5P09917 674 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 GABRB3P28472 473 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 MC5RP33032 325 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 PBX3P40426 434 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 ECI1P42126 302 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 MLLT6P55198 1093 aaPredicted RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 CASP8Q14790 479 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 STRIP1Q5VSL9 837 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 LCN1P1Q5VSP4 162 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 DAB2IPQ5VWQ8 1189 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 KCTD11Q693B1 232 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 ESRP1Q6NXG1 681 aaKnown RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 CASC4Q6P4E1 433 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 USP50Q70EL3 339 aaPredicted RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 CAMK1DQ8IU85 385 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 NELFCDQ8IXH7 590 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 CCDC155Q8N6L0 562 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 ZNF610Q8N9Z0 462 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 POC5Q8NA72 575 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 CCDC150Q8NCX0 1101 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 RNASE8Q8TDE3 154 aaKnown RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 PDCD6IPQ8WUM4 868 aaKnown RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 GLMPQ8WWB7 406 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 GATA6Q92908 595 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 RGMAQ96B86 450 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 RAB3IPQ96QF0 476 aaPredicted RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 DBNDD2Q9BQY9 259 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 TUBB6Q9BUF5 446 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 UPF3BQ9BZI7 483 aaKnown RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 TRIM4Q9C037 500 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 KCNH7Q9NS40 1196 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 DBF4Q9UBU7 674 aaPredicted RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 PADI1Q9ULC6 663 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 CYP8B1Q9UNU6 501 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 ZNF451Q9Y4E5 1061 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 SCAF11Q99590 1463 aaKnown RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 SYNGAP1Q96PV0 1343 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 IQANK1A0A1B0GTG1 560 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 BTBD17A6NE02 478 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 ARNTLO00327 626 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 PLK4O00444 970 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 HNRNPDLO14979 420 aaKnown RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 SYN3O14994 580 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 CLPXO76031 633 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 PIGNO95427 931 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 MATN4O95460 622 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 ADH1AP07327 375 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 SNRPB2P08579 225 aaKnown RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 RALBP11234 206 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 KRT3P12035 628 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 PGM1P36871 562 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 PAFAH1B1P43034 410 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 AARSP49588 968 aaKnown RBP eCLIP4.86□□□□□ -1.63
SMG1-207ENST00000563235 OVGP1Q12889 678 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 NOGQ13253 232 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 MSLNQ13421 630 aaPredicted RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 HYAL4Q2M3T9 481 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 PLEKHS1Q5SXH7 462 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 PTF1AQ7RTS3 328 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 FJX1Q86VR8 437 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 ZZZ3Q8IYH5 903 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 IL17RCQ8NAC3 791 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 GPR156Q8NFN8 814 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 DUSP19Q8WTR2 217 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 CCDC12Q8WUD4 166 aaPredicted RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 DNAJA4Q8WW22 397 aaPredicted RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 EID2BQ96D98 161 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 SPDL1Q96EA4 605 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 MYRFLQ96LU7 910 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 PAQR5Q9NXK6 330 aaPredicted RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 NCDNQ9UBB6 729 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms