RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 TDRD5Q8NAT2 981 aaKnown RBP18.33■□□□□ 0.53
COMMD4-208ENST00000563220 LEMD2Q8NC56 503 aa18.33■□□□□ 0.53
COMMD4-208ENST00000563220 DCAKDQ8WVC6 231 aa18.33■□□□□ 0.53
COMMD4-208ENST00000563220 ZSWIM3Q96MP5 696 aa18.33■□□□□ 0.53
COMMD4-208ENST00000563220 MOCS1Q9NZB8 636 aa18.33■□□□□ 0.53
COMMD4-208ENST00000563220 PSMC3IPQ9P2W1 217 aaPredicted RBP18.33■□□□□ 0.53
COMMD4-208ENST00000563220 DPP7Q9UHL4 492 aa18.33■□□□□ 0.53
COMMD4-208ENST00000563220 ATP9BO43861 1147 aa18.33■□□□□ 0.52
COMMD4-208ENST00000563220 GJB3O75712 270 aa18.33■□□□□ 0.52
COMMD4-208ENST00000563220 PGAM1P18669 254 aa18.33■□□□□ 0.52
COMMD4-208ENST00000563220 CD86P42081 329 aa18.33■□□□□ 0.52
COMMD4-208ENST00000563220 MSH2P43246 934 aa18.33■□□□□ 0.52
COMMD4-208ENST00000563220 WNT3AP56704 352 aa18.33■□□□□ 0.52
COMMD4-208ENST00000563220 MPP3Q13368 585 aa18.33■□□□□ 0.52
COMMD4-208ENST00000563220 DUSP6Q16828 381 aa18.33■□□□□ 0.52
COMMD4-208ENST00000563220 RANBP10Q6VN20 620 aa18.33■□□□□ 0.52
COMMD4-208ENST00000563220 TPGS1Q6ZTW0 290 aa18.33■□□□□ 0.52
COMMD4-208ENST00000563220 KDELC2Q7Z4H8 507 aa18.33■□□□□ 0.52
COMMD4-208ENST00000563220 CCNJLQ8IV13 435 aa18.33■□□□□ 0.52
COMMD4-208ENST00000563220 DDI1Q8WTU0 396 aa18.33■□□□□ 0.52
COMMD4-208ENST00000563220 TADA1Q96BN2 335 aa18.33■□□□□ 0.52
COMMD4-208ENST00000563220 PPP1R2P1Q96PQ5 205 aa18.33■□□□□ 0.52
COMMD4-208ENST00000563220 MUC3BQ9H195 1237 aa18.33■□□□□ 0.52
COMMD4-208ENST00000563220 MSRAQ9UJ68 235 aa18.33■□□□□ 0.52
COMMD4-208ENST00000563220 CLEC4EQ9ULY5 219 aa18.33■□□□□ 0.52
COMMD4-208ENST00000563220 OR51B4Q9Y5P0 310 aa18.33■□□□□ 0.52
COMMD4-208ENST00000563220 CBX4O00257 560 aa18.32■□□□□ 0.52
COMMD4-208ENST00000563220 ALDH1A2O94788 518 aa18.32■□□□□ 0.52
COMMD4-208ENST00000563220 POU2F2P09086 479 aa18.32■□□□□ 0.52
COMMD4-208ENST00000563220 ATP5DP30049 168 aa18.32■□□□□ 0.52
COMMD4-208ENST00000563220 TTC19Q6DKK2 380 aaPredicted RBP18.32■□□□□ 0.52
COMMD4-208ENST00000563220 ZNF783Q6ZMS7 281 aa18.32■□□□□ 0.52
COMMD4-208ENST00000563220 CYS1Q717R9 158 aa18.32■□□□□ 0.52
COMMD4-208ENST00000563220 ARFGAP2Q8N6H7 521 aa18.32■□□□□ 0.52
COMMD4-208ENST00000563220 VN1R2Q8NFZ6 395 aa18.32■□□□□ 0.52
COMMD4-208ENST00000563220 SLC44A1Q8WWI5 657 aa18.32■□□□□ 0.52
COMMD4-208ENST00000563220 FCRL3Q96P31 734 aaPredicted RBP18.32■□□□□ 0.52
COMMD4-208ENST00000563220 NAT9Q9BTE0 207 aa18.32■□□□□ 0.52
COMMD4-208ENST00000563220 TDP1Q9NUW8 608 aa18.32■□□□□ 0.52
COMMD4-208ENST00000563220 PLK2Q9NYY3 685 aa18.32■□□□□ 0.52
COMMD4-208ENST00000563220 UBA2Q9UBT2 640 aaPredicted RBP18.32■□□□□ 0.52
COMMD4-208ENST00000563220 NOTCH4Q99466 2003 aa18.32■□□□□ 0.52
COMMD4-208ENST00000563220 E2F8A0AVK6 867 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 TYW5A2RUC4 315 aaKnown RBP18.31■□□□□ 0.52
COMMD4-208ENST00000563220 FAM159BA6NKW6 160 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 RFXAPO00287 272 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 SNAP91O60641 907 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 PRAMEF12O95522 483 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 CD160O95971 181 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 CEBPBP17676 345 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 ZNF235Q14590 738 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 CBX2Q14781 532 aaPredicted RBP18.31■□□□□ 0.52
COMMD4-208ENST00000563220 CRYMQ14894 314 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 PCSK7Q16549 785 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 PPM1NQ8N819 430 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 ITFG1Q8TB96 612 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 MDM1Q8TC05 714 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 ING5Q8WYH8 240 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 ALG14Q96F25 216 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 FEM1AQ9BSK4 669 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 SAMD15Q9P1V8 674 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 CDH23Q9H251 3354 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 CHD5Q8TDI0 1954 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 SOBPA7XYQ1 873 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 ZMPSTE24O75844 475 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 FAM155BO75949 473 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 CSKP41240 450 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 CHRNA4P43681 627 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 ARF5P84085 180 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 GUCY1A3Q02108 690 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 KCNC3Q14003 757 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 CYTH1Q15438 398 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 MPPE1Q53F39 396 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 TMC5Q6UXY8 1006 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 TMEM135Q86UB9 458 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 TRABD2AQ86V40 505 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 CTAGE3PQ8IX95 158 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 SMG7Q92540 1137 aaKnown RBP18.31■□□□□ 0.52
COMMD4-208ENST00000563220 SEMA3CQ99985 751 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 FSD1LQ9BXM9 530 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 POLR1EQ9GZS1 481 aaKnown RBP18.31■□□□□ 0.52
COMMD4-208ENST00000563220 IL22Q9GZX6 179 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 LMAN2LQ9H0V9 348 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 SLC28A3Q9HAS3 691 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 CHRAC1Q9NRG0 131 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 VPS45Q9NRW7 570 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 RPS6KL1Q9Y6S9 549 aa18.31■□□□□ 0.52
COMMD4-208ENST00000563220 AP3B1O00203 1094 aa18.3■□□□□ 0.52
COMMD4-208ENST00000563220 ZNF197O14709 1029 aa18.3■□□□□ 0.52
COMMD4-208ENST00000563220 UGT1A9O60656 530 aa18.3■□□□□ 0.52
COMMD4-208ENST00000563220 SHOX2O60902 331 aaPredicted RBP18.3■□□□□ 0.52
COMMD4-208ENST00000563220 POLBP06746 335 aa18.3■□□□□ 0.52
COMMD4-208ENST00000563220 CDH18Q13634 790 aa18.3■□□□□ 0.52
COMMD4-208ENST00000563220 RAB30Q15771 203 aa18.3■□□□□ 0.52
COMMD4-208ENST00000563220 MPP7Q5T2T1 576 aa18.3■□□□□ 0.52
COMMD4-208ENST00000563220 TAOK1Q7L7X3 1001 aa18.3■□□□□ 0.52
COMMD4-208ENST00000563220 LRRC6Q86X45 466 aa18.3■□□□□ 0.52
COMMD4-208ENST00000563220 MFN1Q8IWA4 741 aa18.3■□□□□ 0.52
COMMD4-208ENST00000563220 SRRM1Q8IYB3 904 aaKnown RBP18.3■□□□□ 0.52
COMMD4-208ENST00000563220 TTC17Q96AE7 1141 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms