RNA–Protein interactions for RNA: ENST00000563201.1

TNRC6A-210, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 3

Gene TNRC6A, Length 276 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-210ENST00000563201 SHC4Q6S5L8 630 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 KYAT3Q6YP21 454 aaKnown RBP1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 NEK10Q6ZWH5 1172 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 RASGRP2Q7LDG7 609 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 TMC8Q8IU68 726 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 ZDHHC23Q8IYP9 409 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 ADGRF4Q8IZF3 695 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 CACNA2D3Q8IZS8 1091 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 OR4N4Q8N0Y3 316 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 TMEM57Q8N5G2 664 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 ANKRD44Q8N8A2 993 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 PTGR2Q8N8N7 351 aaPredicted RBP1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 ATG16L2Q8NAA4 619 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 C9orf106Q8NAJ2 232 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 SPPL3Q8TCT6 385 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 BICD2Q8TD16 824 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 SLC2A12Q8TD20 617 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 MORC4Q8TE76 937 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 IPO4Q8TEX9 1081 aaKnown RBP1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 WIPF2Q8TF74 440 aaPredicted RBP1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 NCSTNQ92542 709 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 C3orf49Q96BT1 292 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 CAPNS2Q96L46 248 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 SCLT1Q96NL6 688 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 TRAPPC9Q96Q05 1148 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 MACROD1Q9BQ69 325 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 VPS16Q9H269 839 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 PABPC3Q9H361 631 aaKnown RBP1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 TAF1DQ9H5J8 278 aaPredicted RBP1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 EPS8L2Q9H6S3 715 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 PDE11AQ9HCR9 933 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 GJB4Q9NTQ9 266 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 HIF1ANQ9NWT6 349 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 TRNAU1APQ9NX07 287 aaKnown RBP1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 IGSF9Q9P2J2 1179 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 KLHL13Q9P2N7 655 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 RNF7Q9UBF6 113 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 LPAR3Q9UBY5 353 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 TAGLN3Q9UI15 199 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 SLC25A13Q9UJS0 675 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 CDC23Q9UJX2 597 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 ASAP1Q9ULH1 1129 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 VPS4AQ9UN37 437 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 DTX4Q9Y2E6 619 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 PCDHB2Q9Y5E7 798 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 COPG1Q9Y678 874 aaKnown RBP1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 LTBP2Q14767 1821 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 LRRC37A2A6NM11 1700 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 VPS8Q8N3P4 1428 aa1.91□□□□□ -2.1
TNRC6A-210ENST00000563201 USP47Q96K76 1375 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 GLTPD2A6NH11 291 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 DNAJC9-AS1A6NH13 148 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 HMX3A6NHT5 357 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 C2CD4BA6NLJ0 364 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 SLC38A8A6NNN8 435 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 ACKR2O00590 384 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 SPTLC2O15270 562 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 RNMTO43148 476 aaKnown RBP1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 MSI1O43347 362 aaKnown RBP1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 TLX3O43711 291 aaPredicted RBP1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 STRNO43815 780 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 RPP40O75818 363 aaKnown RBP1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 METTL18O95568 372 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 MBPP02686 304 aaPredicted RBP1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 DHRS4L1P0CG22 281 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 PDIA3P30101 505 aaKnown RBP1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 HOXA7P31268 230 aaPredicted RBP1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 CIITAP33076 1130 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 SLC16A2P36021 539 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 PNPLA4P41247 253 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 GPD2P43304 727 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 RASSF2P50749 326 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 RBM5P52756 815 aaKnown RBP eCLIP1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 PGGT1BP53609 377 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 RCAN1P53805 252 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 POLGP54098 1239 aaPredicted RBP1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 SLC37A1P57057 533 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 PPFIA1Q13136 1202 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 DCTN1Q14203 1278 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 GALNT3Q14435 633 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 GRM4Q14833 912 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 SMAD1Q15797 465 aaKnown RBP1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 PLK5Q496M5 336 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 DCAF6Q58WW2 860 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 RUNDC3AQ59EK9 446 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 LCE1EQ5T753 118 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 TTC22Q5TAA0 569 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 TMEM268Q5VZI3 342 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 ZNF425Q6IV72 752 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 C11orf87Q6NUJ2 197 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 DENND1BQ6P3S1 775 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 ZNF474Q6S9Z5 364 aaPredicted RBP1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 ZNF66Q6ZN08 573 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 ZNF793Q6ZN11 406 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 SMIM5Q71RC9 77 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 C1QL2Q7Z5L3 287 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 GALNT7Q86SF2 657 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 RFX6Q8HWS3 928 aa1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 SMAP1Q8IYB5 467 aaPredicted RBP1.9□□□□□ -2.11
TNRC6A-210ENST00000563201 DPP10Q8N608 796 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms