RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 TNFAIP2Q03169 654 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 MCL1Q07820 350 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 SLC13A2Q13183 592 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 ITGB3BPQ13352 177 aaPredicted RBP5.07□□□□□ -1.6
SMG1-206ENST00000562668 RAB32Q13637 225 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 STXBP2Q15833 593 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 DUSP28Q4G0W2 176 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 ARHGEF16Q5VV41 709 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 XRRA1Q6P2D8 792 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 B3GNT9Q6UX72 402 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 DIS3L2Q8IYB7 885 aaKnown RBP5.07□□□□□ -1.6
SMG1-206ENST00000562668 MPP5Q8N3R9 675 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 TBCKQ8TEA7 893 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 CCDC12Q8WUD4 166 aaPredicted RBP5.07□□□□□ -1.6
SMG1-206ENST00000562668 WASF1Q92558 559 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 DEFB118Q96PH6 123 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 TAAR9Q96RI9 348 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 MXRA8Q9BRK3 442 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 WACQ9BTA9 647 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 EFHD1Q9BUP0 239 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 GLT8D2Q9H1C3 349 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 ZSCAN32Q9NX65 697 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 ZHX1Q9UKY1 873 aaPredicted RBP5.07□□□□□ -1.6
SMG1-206ENST00000562668 Q9Y3F1 56 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 PAXBP1Q9Y5B6 917 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 SCN10AQ9Y5Y9 1956 aa5.07□□□□□ -1.6
SMG1-206ENST00000562668 TMEM233B4DJY2 109 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 M0R3H8 397 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 PSMD9O00233 223 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 SOCS2O14508 198 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 DSCR3O14972 297 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 PHGDHO43175 533 aaKnown RBP5.06□□□□□ -1.6
SMG1-206ENST00000562668 SLC37A4O43826 429 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 GCATO75600 419 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 TDP2O95551 362 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 PGK1P00558 417 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 KITP10721 976 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 HOXB6P17509 224 aaKnown RBP5.06□□□□□ -1.6
SMG1-206ENST00000562668 UBA1P22314 1058 aaKnown RBP5.06□□□□□ -1.6
SMG1-206ENST00000562668 GKP32189 559 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 KRT2P35908 639 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 FHL1Q13642 323 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 LRRC41Q15345 812 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 CEP55Q53EZ4 464 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 ANO1Q5XXA6 986 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 MOXD1Q6UVY6 613 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 SEPT14Q6ZU15 432 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 NIPA1Q7RTP0 329 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 SPARTQ8N0X7 666 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 NANOGP1Q8N7R0 232 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 C4orf32Q8N8J7 132 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 ETNPPLQ8TBG4 499 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 BICD2Q8TD16 824 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 ADAMTS18Q8TE60 1221 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 SCFD2Q8WU76 684 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 JPH3Q8WXH2 748 aaPredicted RBP5.06□□□□□ -1.6
SMG1-206ENST00000562668 C8orf76Q96K31 380 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 LRGUKQ96M69 825 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 ACO2Q99798 780 aaKnown RBP5.06□□□□□ -1.6
SMG1-206ENST00000562668 SENP7Q9BQF6 1050 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 SMURF2Q9HAU4 748 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 AGO4Q9HCK5 861 aaKnown RBP5.06□□□□□ -1.6
SMG1-206ENST00000562668 KCNMB3Q9NPA1 279 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 XPNPEP3Q9NQH7 507 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 ZNF180Q9UJW8 692 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 MTMR6Q9Y217 621 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 CNPY2Q9Y2B0 182 aa5.06□□□□□ -1.6
SMG1-206ENST00000562668 GRIN2DO15399 1336 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 NFASCO94856 1347 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 LTBP2Q14767 1821 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 IGKV6D-21A0A0A0MT36 114 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 GSTTP1A0A1W2PQM5 241 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 ANKRD62A6NC57 917 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 B4DLN1 442 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 DNM1LO00429 736 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 CES2O00748 559 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 FCHO1O14526 889 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 MSH4O15457 936 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 FIBPO43427 364 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 TBC1D4O60343 1298 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 CCNE2O96020 404 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 TXNP10599 105 aaKnown RBP5.05□□□□□ -1.6
SMG1-206ENST00000562668 TGFB3P10600 412 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 CAPN2P17655 700 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 SYT1P21579 422 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 AGFG1P52594 562 aaKnown RBP5.05□□□□□ -1.6
SMG1-206ENST00000562668 POLGP54098 1239 aaPredicted RBP5.05□□□□□ -1.6
SMG1-206ENST00000562668 BCAT1P54687 386 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 FOXG1P55316 489 aaPredicted RBP5.05□□□□□ -1.6
SMG1-206ENST00000562668 BEX3Q00994 111 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 PKP1Q13835 747 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 CCNIQ14094 377 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 NONOQ15233 471 aaKnown RBP eCLIP5.05□□□□□ -1.6
SMG1-206ENST00000562668 PTCHD3Q3KNS1 767 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 HSDL1Q3SXM5 330 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 ZNF260Q3ZCT1 412 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 ANO6Q4KMQ2 910 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 CELF3Q5SZQ8 465 aaKnown RBP5.05□□□□□ -1.6
SMG1-206ENST00000562668 DCAF12L1Q5VU92 463 aa5.05□□□□□ -1.6
SMG1-206ENST00000562668 SHC4Q6S5L8 630 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms