RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 AGAP7PQ5VUJ5 663 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 RNF19BQ6ZMZ0 732 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 CPSF7Q8N684 471 aaKnown RBP14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 ATP6V0D2Q8N8Y2 350 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 TERB1Q8NA31 727 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 RCN3Q96D15 328 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 FAR2Q96K12 515 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 DUS2Q9NX74 493 aaKnown RBP14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 DDX56Q9NY93 547 aaKnown RBP14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 PTBP2Q9UKA9 531 aaKnown RBP14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 F8VP50 259 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 ACOT8O14734 319 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 CLPXO76031 633 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 KCNH1O95259 989 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 SERPINE1P05121 402 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 CSH1P0DML2 217 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 CSH2P0DML3 217 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 CD19P15391 556 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 CKMT2P17540 419 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 POLR2EP19388 210 aaKnown RBP14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 TBXAS1P24557 533 aaPredicted RBP14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 PIK3R1P27986 724 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 ETFBP38117 255 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 NEDD8Q15843 81 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 SLC9B1Q4ZJI4 515 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 NHSL2Q5HYW2 709 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 FAAH2Q6GMR7 532 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 ZNF354CQ86Y25 554 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 SNX29P2Q8IUI4 249 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 FEZF2Q8TBJ5 459 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 COG4Q9H9E3 785 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 ANKMY1Q9P2S6 941 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 RABL2BQ9UNT1 228 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 TRAF6Q9Y4K3 522 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 TLL2Q9Y6L7 1015 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 HMX2A2RU54 273 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 TRIM64BA6NI03 449 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 HPCAL1P37235 193 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 GABRB2P47870 512 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 DNASE1L3Q13609 305 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 LRP8Q14114 963 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 ZBTB49Q6ZSB9 765 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 BPHLQ86WA6 291 aaPredicted RBP14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 ZNF677Q86XU0 584 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 SPATA17Q96L03 361 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 PTPN18Q99952 460 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 XYLT2Q9H1B5 865 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 C2orf40Q9H1Z8 148 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 CXCL16Q9H2A7 254 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 NOL11Q9H8H0 719 aaKnown RBP14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 NANOGQ9H9S0 305 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 WDR41Q9HAD4 459 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 PCDH12Q9NPG4 1184 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 IP6K2Q9UHH9 426 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 LACTBL1A8MY62 500 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 FAM155AB1AL88 458 aaPredicted RBP14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 H3BRB1 525 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 JRKO75564 520 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 PROZP22891 400 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 OPRL1P41146 370 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 DPYSL3Q14195 570 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 N4BP2L1Q5TBK1 243 aaPredicted RBP14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 C10orf107Q8IVU9 208 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 ELMOD1Q8N336 334 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 TNIP2Q8NFZ5 429 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 GABPB2Q8TAK5 448 aaPredicted RBP14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 TFAP2CQ92754 450 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 NIF3L1Q9GZT8 377 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 RPF1Q9H9Y2 349 aaKnown RBP14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 ZC3H7BQ9UGR2 993 aaKnown RBP14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 HMGXB4Q9UGU5 601 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 VPS28Q9UK41 221 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 SLC27A5Q9Y2P5 690 aa14.22□□□□□ -0.13
GTF3C1-203ENST00000562609 GOLGA8QA0A0J9YX86 632 aa14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 RGSL1A5PLK6 1076 aa14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 GOLGA8OA6NCC3 632 aa14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 GOLGA8NF8WBI6 632 aa14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 AKAP10O43572 662 aa14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 CST8O60676 142 aa14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 ITGB3P05106 788 aa14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 STAG3L1P0CL83 205 aa14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 POLR2BP30876 1174 aaKnown RBP14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 ASPAP45381 313 aa14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 CCNA1P78396 465 aa14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 ENPEPQ07075 957 aa14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 LAMC2Q13753 1193 aa14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 GPR142Q7Z601 462 aa14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 DSG4Q86SJ6 1040 aa14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 CLIP4Q8N3C7 705 aa14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 AGR3Q8TD06 166 aa14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 OR52B2Q96RD2 323 aa14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 C16orf70Q9BSU1 422 aa14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 MTG1Q9BT17 334 aaPredicted RBP14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 RNF38Q9H0F5 515 aa14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 PNPLA8Q9NP80 782 aa14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 SIX4Q9UIU6 781 aa14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 EMCNQ9ULC0 261 aa14.21□□□□□ -0.13
GTF3C1-203ENST00000562609 MYCLP1P12525 358 aaPredicted RBP14.21□□□□□ -0.14
GTF3C1-203ENST00000562609 SMPD1P17405 629 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms