RNA–Protein interactions for RNA: ENST00000561956.1

AC009054.2-201, humanhuman

TSL 3 BASIC

Gene AC009054.2, Length 374 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009054.2-201ENST00000561956 LINGO4Q6UY18 593 aa11.03□□□□□ -0.64
AC009054.2-201ENST00000561956 C12orf40Q86WS4 652 aa11.03□□□□□ -0.64
AC009054.2-201ENST00000561956 BBS5Q8N3I7 341 aa11.03□□□□□ -0.64
AC009054.2-201ENST00000561956 PGBD5Q8N414 524 aa11.03□□□□□ -0.64
AC009054.2-201ENST00000561956 NAT16Q8N8M0 369 aa11.03□□□□□ -0.64
AC009054.2-201ENST00000561956 MCUQ8NE86 351 aa11.03□□□□□ -0.64
AC009054.2-201ENST00000561956 WFIKKN2Q8TEU8 576 aa11.03□□□□□ -0.64
AC009054.2-201ENST00000561956 OXNAD1Q96HP4 312 aaPredicted RBP11.03□□□□□ -0.64
AC009054.2-201ENST00000561956 PPP1R2P1Q96PQ5 205 aa11.03□□□□□ -0.64
AC009054.2-201ENST00000561956 PSKH2Q96QS6 385 aa11.03□□□□□ -0.64
AC009054.2-201ENST00000561956 MGME1Q9BQP7 344 aa11.03□□□□□ -0.64
AC009054.2-201ENST00000561956 MLPHQ9BV36 600 aaPredicted RBP11.03□□□□□ -0.64
AC009054.2-201ENST00000561956 TRMT61BQ9BVS5 477 aaKnown RBP11.03□□□□□ -0.64
AC009054.2-201ENST00000561956 CINPQ9BW66 212 aaPredicted RBP11.03□□□□□ -0.64
AC009054.2-201ENST00000561956 SLC25A51Q9H1U9 297 aa11.03□□□□□ -0.64
AC009054.2-201ENST00000561956 DNAJC17Q9NVM6 304 aaKnown RBP11.03□□□□□ -0.64
AC009054.2-201ENST00000561956 SLC27A6Q9Y2P4 619 aa11.03□□□□□ -0.64
AC009054.2-201ENST00000561956 MIA3Q5JRA6 1907 aa11.03□□□□□ -0.64
AC009054.2-201ENST00000561956 COL4A2P08572 1712 aa11.03□□□□□ -0.64
AC009054.2-201ENST00000561956 ERI2A8K979 691 aaKnown RBP11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 E7EVH7 732 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 TRIM24O15164 1050 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 TULP3O75386 442 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 TMCC1O94876 653 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 SUN1O94901 812 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 AP2A1O95782 977 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 APRTP07741 180 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 HSPA9P38646 679 aaKnown RBP11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 SERPINH1P50454 418 aaKnown RBP11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 MAXP61244 160 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 NIPAL4Q0D2K0 466 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 NR1H3Q13133 447 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 PRPSAP1Q14558 356 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 SMAD2Q15796 467 aaKnown RBP11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 GEN1Q17RS7 908 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 SYCP2LQ5T4T6 812 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 KCTD11Q693B1 232 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 PPP1R21Q6ZMI0 780 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 ADIPOR2Q86V24 386 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 AHI1Q8N157 1196 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 PDCD7Q8N8D1 485 aaKnown RBP11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 ARRDC2Q8TBH0 407 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 TTC17Q96AE7 1141 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 IMP4Q96G21 291 aaKnown RBP11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 PWWP2AQ96N64 755 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 PHF7Q9BWX1 381 aaPredicted RBP11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 FRMD8Q9BZ67 464 aaPredicted RBP11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 TXLNGYQ9BZA5 131 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 PHACTR1Q9C0D0 580 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 POLR1EQ9GZS1 481 aaKnown RBP11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 TSPYL1Q9H0U9 437 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 HAUS2Q9NVX0 235 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 LHX3Q9UBR4 397 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 TTLL3Q9Y4R7 772 aa11.02□□□□□ -0.65
AC009054.2-201ENST00000561956 TICRRQ7Z2Z1 1910 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 GOLGA6CA6NDK9 693 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 GOLGA6BA6NDN3 693 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 GOLGA8MH3BSY2 632 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 PSMD3O43242 534 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 PPFIA2O75334 1257 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 ANXA9O76027 345 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 MT-CO1P00395 513 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 MMP2P08253 660 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 GOLGA6DP0CG33 693 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 CR2P20023 1033 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 GJA4P35212 333 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 OPRD1P41143 372 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 EIF2DP41214 584 aaKnown RBP11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 CTSOP43234 321 aaPredicted RBP11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 RGRP47804 291 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 SLC6A11P48066 632 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 LMAN1P49257 510 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 GEMP55040 296 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 ARL4CP56559 192 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 DSC2Q02487 901 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 SULT2A1Q06520 285 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 SLC20A2Q08357 652 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 ITKQ08881 620 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 CBLBQ13191 982 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 ITPRIPL2Q3MIP1 535 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 TMEM215Q68D42 235 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 MBLAC2Q68D91 279 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 GRAMD4Q6IC98 578 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 KDELC1Q6UW63 502 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 CEP128Q6ZU80 1094 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 ZNF534Q76KX8 674 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 TMC3Q7Z5M5 1100 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 METTL3Q86U44 580 aaKnown RBP11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 PRPF39Q86UA1 669 aaKnown RBP11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 CAND1Q86VP6 1230 aaKnown RBP11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 PHTF2Q8N3S3 785 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 MREGQ8N565 214 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 TSEN2Q8NCE0 465 aaKnown RBP11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 SPATA22Q8NHS9 363 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 NXPE3Q969Y0 559 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 TADA1Q96BN2 335 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 SERPINB12Q96P63 405 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 RBM15Q96T37 977 aaKnown RBP eCLIP11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 SEMA3CQ99985 751 aa11.01□□□□□ -0.65
AC009054.2-201ENST00000561956 LRRC40Q9H9A6 602 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms