RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 CYP4F8P98187 520 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 RFTN1Q14699 578 aaPredicted RBP13.1□□□□□ -0.31
SNX1-211ENST00000560829 SLC14A2Q15849 920 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 CXorf57Q6NSI4 855 aaKnown RBP13.1□□□□□ -0.31
SNX1-211ENST00000560829 PKN3Q6P5Z2 889 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 CES3Q6UWW8 571 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 RGS9BPQ6ZS82 235 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 HS6ST3Q8IZP7 471 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 OR7D4Q8NG98 312 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 MFSD3Q96ES6 412 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 APOPT1Q96IL0 206 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 TLR9Q9NR96 1032 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 CHRAC1Q9NRG0 131 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 HAUS2Q9NVX0 235 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 ZFATQ9P243 1243 aa13.1□□□□□ -0.31
SNX1-211ENST00000560829 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.09□□□□□ -0.31
SNX1-211ENST00000560829 RB1P06400 928 aa13.09□□□□□ -0.31
SNX1-211ENST00000560829 GP5P40197 560 aa13.09□□□□□ -0.31
SNX1-211ENST00000560829 CD86P42081 329 aa13.09□□□□□ -0.31
SNX1-211ENST00000560829 CCT5P48643 541 aa13.09□□□□□ -0.31
SNX1-211ENST00000560829 NEK3P51956 506 aa13.09□□□□□ -0.31
SNX1-211ENST00000560829 EPHA5P54756 1037 aa13.09□□□□□ -0.31
SNX1-211ENST00000560829 MAXP61244 160 aa13.09□□□□□ -0.31
SNX1-211ENST00000560829 DSC2Q02487 901 aa13.09□□□□□ -0.31
SNX1-211ENST00000560829 IHHQ14623 411 aa13.09□□□□□ -0.31
SNX1-211ENST00000560829 SLC1A5Q15758 541 aa13.09□□□□□ -0.31
SNX1-211ENST00000560829 PLPP4Q5VZY2 271 aa13.09□□□□□ -0.31
SNX1-211ENST00000560829 HTR3DQ70Z44 454 aa13.09□□□□□ -0.31
SNX1-211ENST00000560829 LRRC34Q8IZ02 419 aa13.09□□□□□ -0.31
SNX1-211ENST00000560829 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.09□□□□□ -0.31
SNX1-211ENST00000560829 HJURPQ8NCD3 748 aaPredicted RBP13.09□□□□□ -0.31
SNX1-211ENST00000560829 PSKH2Q96QS6 385 aa13.09□□□□□ -0.31
SNX1-211ENST00000560829 RANBP9Q96S59 729 aa13.09□□□□□ -0.31
SNX1-211ENST00000560829 CPNE1Q99829 537 aa13.09□□□□□ -0.31
SNX1-211ENST00000560829 MLXIPLQ9NP71 852 aa13.09□□□□□ -0.31
SNX1-211ENST00000560829 ZNF510Q9Y2H8 683 aa13.09□□□□□ -0.31
SNX1-211ENST00000560829 DOCK4Q8N1I0 1966 aa13.09□□□□□ -0.31
SNX1-211ENST00000560829 LOC285095A0A1B0GVY8 99 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 TSPAN3O60637 253 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 FGF19O95750 216 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 ERVK-10P10266 1014 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 PYGBP11216 843 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 SYN1P17600 705 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 ADRA1DP25100 572 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 HOXA9P31269 272 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 OXCT1P55809 520 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 MSLNQ13421 630 aaPredicted RBP13.08□□□□□ -0.32
SNX1-211ENST00000560829 ZNF235Q14590 738 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 PPM1LQ5SGD2 360 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 TEDDM1Q5T9Z0 273 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 GRTP1Q5TC63 336 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 IL31Q6EBC2 164 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 FOXR1Q6PIV2 292 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 CPLX4Q7Z7G2 160 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 RASSF3Q86WH2 238 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 BBS5Q8N3I7 341 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 PPHLN1Q8NEY8 458 aaKnown RBP13.08□□□□□ -0.32
SNX1-211ENST00000560829 TCP10LQ8TDR4 215 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 ACMSDQ8TDX5 336 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 GCNAQ96QF7 691 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 KLF6Q99612 283 aaPredicted RBP13.08□□□□□ -0.32
SNX1-211ENST00000560829 MGME1Q9BQP7 344 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 ASAH2Q9NR71 780 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 SEPT3Q9UH03 358 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 GGA2Q9UJY4 613 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 LSM7Q9UK45 103 aaKnown RBP13.08□□□□□ -0.32
SNX1-211ENST00000560829 TCAF1Q9Y4C2 921 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 PSAT1Q9Y617 370 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 TRAV19A0A0A6YYK7 116 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 GOLGA8RI6L899 631 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 MUSKO15146 869 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 LPXNO60711 386 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 EPOP01588 193 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 DHRS4L1P0CG22 281 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 NMBRP28336 390 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 ETV4P43268 484 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 ITKQ08881 620 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 BMPR2Q13873 1038 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 CAMK1Q14012 370 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 PDK4Q16654 411 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 QPCTQ16769 361 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 PDPK2PQ6A1A2 396 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 TAX1BP1Q86VP1 789 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 KCNMB4Q86W47 210 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 CPXM2Q8N436 756 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 MAB21L3Q8N8X9 362 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 GDAP1Q8TB36 358 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 SLC22A17Q8WUG5 538 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 ISL2Q96A47 359 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 ZNF778Q96MU6 729 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 C17orf80Q9BSJ5 609 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 MCMBPQ9BTE3 642 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 PRKD2Q9BZL6 878 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 ATXN3LQ9H3M9 355 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 UBA2Q9UBT2 640 aaPredicted RBP13.08□□□□□ -0.32
SNX1-211ENST00000560829 NUP205Q92621 2012 aa13.08□□□□□ -0.32
SNX1-211ENST00000560829 ALPK3Q96L96 1907 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 A0A1W2PRU2 124 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 TYW5A2RUC4 315 aaKnown RBP13.07□□□□□ -0.32
SNX1-211ENST00000560829 SOBPA7XYQ1 873 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms